1dlc_ref1 - reference 1


Name                 endotoxin														

Number of sequences              4
Alignment Length                 639
Longest Sequence                 590
Shortest Sequence                567
Average Percent Identity         33
Maximum Percent Identity         41
Minimum Percent Identity         26

Sequence Name    SWISSPROT Accession
cr70_bacto           P17969         
cryx_bactk           P05517         
crys_bacta           P19415         
crys_bacti           P05519         

Family   cr70_bacto cryx_bactk crys_bacta crys_bacti


cr70_bacto   1  tvkdaVGTGISVVGQILGVVGVPFAGALt..sFYQSFLNAIWps....da
cryx_bactk   1  .sastVQTGINIAGRILGVLGVPFAGQLa..sFYSFLVGELWpr....gr
crys_bacta   1  ..eerLETGNTVADISLGLINFLYSNFVpgggFIVGLLELIWgf...igp
crys_bacti   1  .....VSTALKVAGAILKFVNPPAGTVL...tVLSAVLPILWptntptpe

cr70_bacto  45  dpWKAFMAQVEVLIDKKIEEYAKSKALAELQGLQNNFEDYVNALDSWKKA
cryx_bactk  44  dqWEIFLEHVEQLINQQITENARNTALARLQGLGDSFRAYQQSLEDWLEN
crys_bacta  46  sqWDIFLAQIEQLISQRIEEFARNQAISRLEGLSNLYKVYVRAFSDWEKD
crys_bacti  43  rvWNDFMTNTGNLIDQTVTAYVRTDANAKMTVVKDYLDQYTTKFNTWKRE

cr70_bacto  95  PVNLRSRrsqdrirelFSQAESHFRNSMPSFA.VSKFEVLFLPTYAQAAN
cryx_bactk  94  RDDARTR...svlytqYIALELDFLNAMPLFA.IRNQEVPLLMVYAQAAN
crys_bacta  96  PTNPALR...eemriqFNDMNSALITAIPLFR.VQNYEVALLSVYVQAAN
crys_bacti  93  PNNQSYR...tavitqFNLTSAKLRETAVYFSNLVGYELLLLPIYAQVAN

cr70_bacto 144  THLLLLKDAQVFGEEWGYSSEDIAEFYQRQLKLTQQYTDHCVNWYNVGLN
cryx_bactk 140  LHLLLLRDASLFGSEFGLTSQEIQRYYERQVERTRDYSDYCVEWYNTGLN
crys_bacta 142  LHLSILRDVSVFGERWGYDTATINNRYSDLTSLIHVYTNHCVDTYNQGLR
crys_bacti 140  FNLLLIRDGLINAQEWSLARSRGDQLYNTMVQYTKEYIAHSITWYNKGLD

cr70_bacto 194  SLRGSTYDAWVKFNRFRREMTLTVLDLIVLFPFYDVRLYskg.......v
cryx_bactk 190  SLRGTNAASWVRYNQFRRDLTLGVLDLVALFPSYDTRTYpin.......t
crys_bacta 192  RLEGRFLSDWIVYNRFRRQLTISVLDIVAFFPNYDIRTYpiq.......t
crys_bacti 190  VLRNKSNGQWITFNDYKREMTIQVLDILALFASYDPRRYpadkidntkls

cr70_bacto 237  ktELTRDIFTdpif....tlnalqey...gpTFSSIEns.iRKPHLFDYL
cryx_bactk 233  saQLTREVYTdaigatgvnmasmnwynnnapSFSAIEaaaiRSPHLLDFL
crys_bacta 235  atQLTREVYLdlpfine.nlspaasy....pTFSAAEsaiiRSPHLVDFL
crys_bacti 240  ktEFTREIYTalve......spss......kSIAALEaaltRDVHLFTWL

cr70_bacto 279  RGIEFHtrlrpgysgkdsfnYWSGNYVEtrpsigsndtitspfyg..dks
cryx_bactk 283  EQLTIFsass.rwsntrhmtYWRGHTIQsrp.iggg.lnts.thgatnts
crys_bacta 280  NSFTIYtdsl......aryaYWGGHLVNsfrtgtttnlirsplygregnt
crys_bacti 278  KRVDFWtnti.....yqdlrFLSANKIGfsytnssa.mqesgiyg...ss

cr70_bacto 327  iepiqklsfdgq...kVYRTiantdiaafpdg.kiyfgVTKVDFsqyddq
cryx_bactk 329  inp.vtlrfasr...dVYRTesyagvllwgiylepihgVPTVRFnftnpq
crys_bacta 324  erp.vtitaspsv..pIFRTlsyitgldns...npvagIEGVEFqnt...
crys_bacti 319  gfg.snlthqiqlnsnVYKTsitdtss.......psnrVTKMDFyki...

cr70_bacto 373  .knetstqtydskryngylgaqdsidqlpp..ettdeplekAYSHQLNYA
cryx_bactk 375  nisdrgtanysqpyespglqlkdsetelpp..etterpnyeSYSHRLSHI
crys_bacta 365  ....isrsiyrks......gpidsfselpp.qdasvsp.aiGYSHRLCHA
crys_bacti 358  ...dgtlasynsnitptpeglrttffgfstnentpnqptvnDYTHILSYI

cr70_bacto 420  ecflmq.drrgtiPFFTWTHRSVDFFNTIDAEKITQLPVVKAYALSSGAS
cryx_bactk 423  giilq...srvnvPVYSWTHRSADRTNTIGPNRITQIPMVKASELPQGTT
crys_bacta 403  tflerisgpriagTVFSWTHRSASPTNEVSPSRITQIPWVKAHTLASGAS
crys_bacti 405  ktdvid..ynsnrVSFAWTHKIVDPNNQIYTDAITQVPAVKSNFLNATAK

cr70_bacto 469  IIEGPGFTGGNLLflkessnsi....akfkvtlnsaallQRYRVRIRYAS
cryx_bactk 470  VVRGPGFTGGDIL.rrtntggf....gpirvtvngp.ltQRYRIGFRYAS
crys_bacta 453  VIKGPGFTGGDIL.trnsmgel....gtlrvtftgr.lpQSYYIRFRYAS
crys_bacti 453  VIKGPGHTGGDLValtsngtlsgrmeiqcktsifnd.ptRSYGLRIRYAA

cr70_bacto 515  TTNLRLFVQNSNNDflv...iyinkt.....mnidgDLTYQTFDFatsn.
cryx_bactk 514  TVDFDFFVSRGGTTvnn...frflrt.....mnsgdELKYGNFVRraft.
crys_bacta 497  VANRSGTFRYSQPPsyg...isfpkt.....mdagePLTSRSFAHttlf.
crys_bacti 502  NSPIVLNVSYVLQGvsrgttistestfsrpnniiptDLKYEEFRYkdpfd

cr70_bacto 556  ..snmgfsgdtndfiigaes..fvsneKIYIDKIEFIPV
cryx_bactk 555  ..tpftftqiqdiirtsiqg..lsgngEVYIDKIEIIPV
crys_bacta 538  ..tpitfsraqeefdlyiqs.......GVYIDRIEFIPV
crys_bacti 552  aivpmrlssnq.litiaiqplnmtsnnQVIIDRIEIIPI

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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