1uky_ref3 - reference 3


Name                 uridyl kin										

Number of sequences              24
Alignment Length                 267
Longest Sequence                 218
Shortest Sequence                176
Average Percent Identity         22
Maximum Percent Identity         70
Minimum Percent Identity         8

Sequence Name    SWISSPROT Accession
1uky                 P15700         
kcy_dicdi            P20425         
kad1_pig             P00571         
kad_schma            P25824         
kad_miclu            P33107         
1dvrA                P07170         
kad_mycca            P10251         
kad_bacsu            P16304         
kadc_maize           P43188         
kad_giala            P49982         
kad_salty            P37407         
kad_lacla            P27143         
kad_parde            P10772         
1gky                 P15454         
kgua_bovin           P46195         
kgua_ecoli           P24234         
kgua_mycge           P47353         
va57_vaccv           P31007         
dlg1_drome           Q01230         
1bif                 P25114         
f26l_human           P16118         
f26h_bovin           P26285         
f26_yeast            P32604         
6p21_yeast           P40433         

Family   1uky kcy_dicdi kad1_pig kad_schma kad_miclu 1dvrA kad_mycca kad_bacsu kadc_maize kad_giala kad_salty kad_lacla kad_parde
Family   1gky kgua_bovin kgua_ecoli kgua_mycge dlg1_drome va57_vaccv
Family   1bif f26l_human f26h_bovin f26_yeast 6p21_yeast


1uky         1  pafspdqvsvIFVLGGPGAGKGTQCEKLVkdy.....sfVHLSAGDLLRA
kcy_dicdi    1  meks..kpnvVFVLGGPGSGKGTQCANIVrdf.....gwVHLSAGDLLRQ
kad1_pig     1  ......kskiIFVVGGPGSGKGTQCEKIVqky.....gyTHLSTGDLLRA
kad_schma    1  ......kakvIFVLGGPGSGKGTQCEKLVqkf.....hfNHLSSGDLLRA
kad_miclu    1  .........rMLLMGPPGSGKGTQATRIAdkl.....giVPISTGDIFRH
1dvrA        1  ....ssesirMVLIGPPGAGKGTQAPNLQerf.....haAHLATGDMLRS
kad_mycca    1  ..........IMLLGAPGCGKGTQAEQLVnkl.....nfIQVSTGDLMRK
kad_bacsu    1  ..........LVLMGLPGAGKGTQGERIVedy.....giPHISTGDMFRA
kadc_maize   1  ..........VMISGAPASGKGTQCELIKtky.....qlAHISAGDLLRA
kad_giala    1  .rkk..nlfkLVLLGAPGAGKGTQAKHLVsky.....slKHISPGNLLRE
kad_salty    1  ..........IILLGAPGAGKGTQAQFIMeky.....giPQISTGDMLRA
kad_lacla    1  ..........LLIMGLPGAGKGTQAEFIVkny.....gvNHISTGDMFRA
kad_parde    1  ..........IILLGPPGAGKGTQARRLIder.....glVQLSTGDMLRE
1gky         1  .......srpIVISGPSGTGKSTLLKKLFaey....pdsFGFSVSSTTRT
kgua_bovin   1  ........rpVVLSGPSGAGKSTLLKKLLqeh....gsiFGFSVSHTTRD
kgua_ecoli   1  ...........IVSAPSGAGKSSLIQALLktq...plydTQVSVSHTTRQ
kgua_mycge   1  ........riFVITGPSGVGKSTLVKALLdhf....keqLFYSISATTRK
va57_vaccv   1  ........ksIILSGPSGLGKTAIAKRLWe........yFGFVVSHTTRF
dlg1_drome   1  .......trpVIILGPL...KDRINDDLIsey....pdkFGSCVPHTTRP
1bif         1  ......cptlIVMVGLPARGKTYISKKLTrylnfigvptREFNVGQYRRD
f26l_human   1  .......ptmVIMVGLPARGKTYISTKLTrylnwigtptKVFNLGQYRRE
f26h_bovin   1  .......ptlIVMIGLPARGKTYVSKKLTrylnwigvptKVFNLGVYRRQ
f26_yeast    1  ..........VIMVGLPARGKSFISQKIIrylswlsikaKCFNVGNYRRD
6p21_yeast   1  .........vIVMVGLPATGKSFITNKLSrflnyslyycKVFNVGNTRRK

1uky        46  eqgra.......gsqygelikNCIKEGQ........ivpqeITLALLRNa
kcy_dicdi   44  eqqs........gskdgemiaTMIKNGE........ivpsiVTVKLLKNa
kad1_pig    40  evss........gsargkmlsEIMEKGQ........lvpleTVLDMLRDa
kad_schma   40  evqs........gspkgkelkAMMERGE........lvpleVVLALLKEa
kad_miclu   37  nvks........mtplgveakRYIDNGD........fvpdeVTNRMVADr
1dvrA       42  qiak........gtqlgleakKIMDQGG........lvsddIMVNMIKDe
kad_mycca   36  eisl........nttlglkcqEYMNAGK........yvpdqIVNQIVNQf
kad_bacsu   36  amke........etplgleakSYIDKGE........lvpdeVTIGIVKEr
kadc_maize  36  eiaa........gsengkrakEFMEKGQ........lvpdeIVVNMVKEr
kad_giala   43  emnr........nspitaqikDYVSKGQ........lvpdsIVIKLIENh
kad_salty   36  avks........gselgkqakDIMDAGK........lvtdeLVIALVKEr
kad_lacla   36  amkn........etemgklakSFIDKGE........lvpdeVTNGIVKEr
kad_parde   36  arss........gtemgkrvaEVMDRGE........lvtdeIVIGLIREk
1gky        40  pragevngkdynfvs.vdefkSMIKNNEfiewaqfsgnyygSTVASVKQ.
kgua_bovin  39  prpgeengkdyyfvt.revmqRDIAAGDfiehaefsgnlygTSKAAVRA.
kgua_ecoli  37  prpgevhgehyffvn.hdefkEMISRDAflehaevfgnyygTSREAIEQ.
kgua_mycge  39  krisekegidyffkd.kdefeNLIKQDAfiewacynnhyygTLKSQAEQ.
va57_vaccv  35  prpmeregvdyhyvn.reaiwKGIAAGNflehteflgniygTSKTAVNT.
dlg1_drome  37  kreyevdgrdyhfvssreqmeRDIQNHLfieagqyndnlygTSVASVRE.
1bif        45  mvk.............tyksfEFFLPDN....eeglkirkqCALAALND.
f26l_human  44  av..............syknyEFFLPDN....mealqirkqCALAALKD.
f26h_bovin  44  avk.............syksyDFFRHDN....eeamkirkqCALVALKD.
f26_yeast   41  vsg............nvpmdaEFFNFEN....tdnfklrelAAQNAIKD.
6p21_yeast  42  fak.........ehglkdqdsKFFEPKN....adstrlrdkWAMDTLDE.

1uky        81  isdnv.kankhkFLIDgfprKMDQAISFErdives.....kFILFFDc.p
kcy_dicdi   78  idanq....gknFLVDgfprNEENNNSWEenmkdfvd.t.kFVLFFDc.p
kad1_pig    74  mvakv..dtskgFLIDgyprEVKQGEEFErkigqp.....tLLLYVDa.g
kad_schma   74  minwl..tkiviSLSIryprELDQGIKFEkevcpc.....lCVINFDv.s
kad_miclu   71  iaqad...aehgFLLDgyprTKGQVEALDamlaeagq.slsAVVELEv.p
1dvrA       76  ltnnp..ackngFILVgfprTIPQAEKLDqmlkeqgt.pleKAIELKv.d
kad_mycca   70  lqynn.....dkLIFDgyprTLEQAKLLEkmldlynk.kidYVFYIDv.n
kad_bacsu   70  lgkdd...cergFLLDgfprTVAQAEALEeileeygk.pidYVINIEv.d
kadc_maize  70  lrqpd..aqengWLLDgyprSYSQAMALEtleirp.....dTFILLDv.p
kad_giala   77  iatig....dsnWLLDgfprSESQAAALRaspdlfp....tHIVELKv.d
kad_salty   70  iaqed...crngFLLDgfprTIPQADAMKeagivv.....dYVLEFDv.p
kad_lacla   70  laqdd..ikasgFLLDgyprTIDQAHALDtmleelgi.kldAVVNIVv.n
kad_parde   70  lgqgg.....kgFIFDgfprTLAQADALQalmaemdq.ridAVIEMRv.d
1gky        88  vsks.....gktCILD...iDMQGVKSVKaipeln.....aRFLFIApps
kgua_bovin  87  vqam.....nriCVLD...vDLQGVRNIKktdlrp......IYIFVQpps
kgua_ecoli  85  vlat.....gvdVFLD...iDWQGAQQIRqkmpha......RSIFILpps
kgua_mycge  87  aiks.....ginLMLE...iEYQGALQVKskyphn.....vVLIFIKpps
va57_vaccv  83  aain.....nriCVMD...lNIDGVRSLKntylmp......YSVYIRpts
dlg1_drome  86  vaek.....gkhCILD...vSGNAIKRLQvaqlyp......VAVFIKpks
1bif        77  vrkflseegghvAVFDatntTRERRAMIF.nfgeqng.yktFFVESIcvd
f26l_human  75  vhnylsheeghvAVFDatntTRERRSLIL.qfakehg.ykvFFIESIcnd
f26h_bovin  76  vkaylteesgqiAVFDatntTRERRDLIL.nfaeens.fkvFFVESVcdd
f26_yeast   74  ivnfftkedgsvAVFDatnsTRKRRKWLK.diceknn.iqpMFLESWsnd
6p21_yeast  78  lldyllegsgsvGIFDatntSRERRKNVLarirkrsphlkvLFLESVcsd

1uky       124  EDIMLERLLERgkts............................grsddni
kcy_dicdi  121  EEVMTQRLLKRgess............................grsddni
kad1_pig   116  PETMTKRLLKRgets............................grvddne
kad_schma  116  EEVMRKRLLKRaets............................nrvddne
kad_miclu  116  DEELVERLLKRaeie............................graddtq
1dvrA      122  DELLVARITGRlihpasgrsyhkifnppkedmkddvtg.ealvqisddna
kad_mycca  113  EQILIKRITNRlvcplckasfnletrkpkqeglcdfdn.tklvkrsddsl
kad_bacsu  115  KDVLMERLTGRricsvcgttyhlvfnppktpgicdkdg.gelyqraddne
kadc_maize 112  DELLVERVVGRrldpvtgkiyhlkysppeneeiasrlt.....qrfddte
kad_giala  118  QEAVVQRLGGRrfdpitgntyhiiydppppdiadrvv......vrtddre
kad_salty  111  DELIVDRIVGRrvhaasgrvyhvkfnppkvegkddvtg.edlttrkddqe
kad_lacla  116  PNILVDRLSGRyicrncgatyhkifnptkvegtcdvcgshdlyqraddvp
kad_parde  113  DAALVSRISGRfthgncgevygdvtkptkepgkcdvcgstdlrrraddne
1gky       125  VEDLKKRLEGRgt..................................ete
kgua_bovin 123  LDVLEQRLRQRnt..................................ete
kgua_ecoli 121  KIELDRRLRGRgq..................................dse
kgua_mycge 124  MQELLKRLKKRnd..................................ede
va57_vaccv 119  LKMVETKLRCRnt..................................ean
dlg1_drome 122  VDSVMEMNRRMte..................................eqa
1bif       125  PEVIAANIVQVklgspdyvn.......................rdsdeat
f26l_human 123  PGIIAENIRQVklgspdyid.......................cdrekvl
f26h_bovin 124  PDVIAANILEVkvsspdype.......................rnrenvm
f26_yeast  122  HELIINNAKDIgstspdyen.......................sephvae
6p21_yeast 128  HALVQKNI.RLklfgpdykg.......................kdpessl

1uky       146  esIKKRFNTFKETsmpvieyfet.....kskVVRVRcdr...........
kcy_dicdi  143  esIKKRFNTFNVQtklvidhynk.....fdkVKIIPanr...........
kad1_pig   138  etIKKRLETYYKAtepviafyek.....rgiVRKVNaeg...........
kad_schma  138  etIVKRFRTFNELtkpviehykq.....qnkVITIDasg...........
kad_miclu  138  evIEHRLDLYHREtesviqeyve.....rgiVARVDgtg...........
1dvrA      171  daLKKRLAAYHAQtepivdfykk.....tgiWAGVDasq...........
kad_mycca  162  dkVKIRLQTYKEQtlplidyfkt.....nskFIEIKadnl..........
kad_bacsu  164  etVSKRLEVNMKQtqplldfyse.....kgyLANVNgqq...........
kadc_maize 157  ekVKLRLETYYQNiesllsty.......eniIVKVQgda...........
kad_giala  162  dvIRERFRVYAENkdlvdkvf.......nhsVVSINcegq..........
kad_salty  160  etVRKRLVEYHQMtapligyyqkeaeagntkYAKVDgtq...........
kad_lacla  166  etVKNRLDVNIKEsapiiehy.....telglVKNIEgeq...........
kad_parde  163  esLKTRLMEYYKKtspligyy.....yvkgnLNPVDgla...........
1gky       141  esINKRLSAAQAE.layaet.........gaHDKVIvnd...........
kgua_bovin 139  esLAKRLAAARAD.messkep........glFDLIIvnd...........
kgua_ecoli 137  evIAKRMAQAVAE.mshyae...........YDYLIvnd...........
kgua_mycge 140  ttIKKRLEQAKIE.fqqidn...........FKYVVtnk...........
va57_vaccv 135  deIHRRVILAKTD.mdeanea........glFDTIIied...........
dlg1_drome 138  kkTYERAIKMEQE.fgey.............FTGVVqgd...........
1bif       152  edFMRRIECYENS.yesldee....qdrdlsYIKIMdvgqsyvvnrvadh
f26l_human 150  edFLKRIECYEVN.yqpldee....ldshlsYIKIFdvgtrymvnrvqdh
f26h_bovin 151  ddFLKRIECYKVT.yqpldpd...shdkdlsFIKVInvgqrflvnkvqdy
f26_yeast  149  adFLERIRQYERF.yepldpq....kdkdmtFIKLVniieevvinkirty
6p21_yeast 154  kdFKSRLANYLKA.yepied......denlqYIKMIdvgkkviayniqgf

1uky       180  SVEDVYKDVQDAIrdsl
kcy_dicdi  177  DVNEVYNDVENLFk...
kad1_pig   172  SVDDVFSQVCTHL....
kad_schma  172  TVDAIFDKVNHELq...
kad_miclu  172  QIDDVTERLLQAV....
1dvrA      205  PPATVWADILNKLgkn.
kad_mycca  197  SAEQVFNQIKGELk...
kad_bacsu  198  DIQDVYADVKDLL....
kadc_maize 189  TVDAVFAKIDELLgsi.
kad_giala  195  TIDEVSLQLDRVLs...
kad_salty  199  AVADVRAALEKIL....
kad_lacla  200  EISQVTDDIKKVL....
kad_parde  197  EIDEVAAQVAKVM....
1gky       170  DLDKAYKELKDFIfaek
kgua_bovin 169  SLDKAYWALKEALsee.
kgua_ecoli 164  DFDTALTDLKTIIrae.
kgua_mycge 167  EFDKTLNELKSILlse.
va57_vaccv 165  DVNLAYSKLIQIL....
dlg1_drome 163  TIEEIYSKVKSMIwsq.
1bif       197  iqsrivyylmnihv...
f26l_human 195  iqsrtvyylmnihv...
f26h_bovin 197  iqskivyylmnihv...
f26_yeast  194  lesrivfyvmnirp...
6p21_yeast 197  lasqtvyyllnfnl...

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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