1ubi_ref1 - reference 1


Name                 ubiquitin

Number of sequences              4
Alignment Length                 104
Longest Sequence                 94
Shortest Sequence                76
Average Percent Identity         16
Maximum Percent Identity         21
Minimum Percent Identity         13

Sequence Name    SWISSPROT Accession
1ubi                 P02248         
1guaB                P10113         
1alo                 Q46509         
1awd                 P56408         

Family   1ubi 1guaB 1alo 1awd


1ubi         1  mqifvktltgktITLEVEPSDTIENVKakiqdkegIPPD.......qqrl
1guaB        1  ntirvflpnkqrTVVNVRNGMSLHDCLmkalkvrgLQPE.......ccav
1alo         1  miqkvitvngieQNLFVDAEALLSDVLrqqlgltgVKVGceqgqcgacsv
1awd         1  ykvtlktpsg.eETIECPEDTYILDAAeea.gld.LPYScragacsscag

1ubi        44  ifa.................gkqle..dgrtlsdyniqkesTLHLVLrlr
1guaB       44  frllheh............kgkkarldwntdaasl...igeELQVDFl..
1alo        51  ild.................gkvvr..acvtkmkrva...dGAQITTieg
1awd        48  kvesgevdqsdqsflddaqmgkgfvl.tcvaypt......sDVTILThqe

1ubi        75  gg..
1guaB       77  ....
1alo        79  vgq.
1awd        91  aaly

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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