S52_ref5 - reference 5


Name                 nuclear receptor

Number of sequences              5
Alignment Length                 337
Longest Sequence                 334
Shortest Sequence                224
Average Percent Identity         29
Maximum Percent Identity         36
Minimum Percent Identity         24

Sequence Name    SWISSPROT Accession
THA1_HUMAN           P21205         
E75A_DROME           P17671         
ROR2_HUMAN           P35398         
RRA1_HUMAN           P10276         
EAR1_HUMAN           P20393         

Family   THA1_HUMAN E75A_DROME ROR2_HUMAN RRA1_HUMAN EAR1_HUMAN


THA1_HUMAN   1  PTPEEWDLIHIATEAHrstnaqg.....shwkqrrkflpdd.igqspivs
E75A_DROME   1  ELDDQPRLLAAVLRAHlet.........ceftkekvsamrqrardcpsys
ROR2_HUMAN   1  SMAELEHLAQNISKSHlet.........cqylreelqqitwq........
RRA1_HUMAN   1  LTPEVGELIEKVRKAHqetfpal.....cqlgkyttnnsseqr.......
EAR1_HUMAN   1  PEPTVEDVISQVARAHreiftyahdklgsspgnfnanhasgsppattphr

THA1_HUMAN  45  mp................................................
E75A_DROME  42  mp................................................
ROR2_HUMAN  34  ..................................................
RRA1_HUMAN  39  ..................................................
EAR1_HUMAN  51  wenqgcppapndnntlaaqrhnealnglrqapssypptwppgpahhschq

THA1_HUMAN  47  ...............................................dgd
E75A_DROME  44  .................................tllacpln........p
ROR2_HUMAN  34  .................................tflqeeienyqn....k
RRA1_HUMAN  39  .................................................v
EAR1_HUMAN 101  snsnghrlcpthvyaapegkapansprqgnsknvllacpmnmyphgrsgr

THA1_HUMAN  50  kvdleafseftkiitpaitrvVDFAKKLPMFSELPCEDqiillkgccmei
E75A_DROME  53  apelqseqefsqrfahvirgvIDFAGMIPGFQLLTQDDkftllkaglfda
ROR2_HUMAN  47  qrev.mwqlcaikiteaiqyvVEFAKRIDGFMELCQNDqivllkagslev
RRA1_HUMAN  40  sldidlwdkfselstkciiktVEFAKQLPGFTTLTIADqitllkaacldi
EAR1_HUMAN 151  tvq.eiwedfsmsftpavrevVEFAKHIPGFRDLSQHDqvtllkagtfev

THA1_HUMAN 100  mslraavrydpesdtltlsgemavkreqlkngglgvvs.daifelgksls
E75A_DROME 103  lfvrlicmfdssinsiiclngqvmrrdaiqnganarflvdstfnfaermn
ROR2_HUMAN  96  vfirmcrafdsqnntvyf.dgkyaspdvfkslgcedfi.sfvfefgkslc
RRA1_HUMAN  90  lilrictrytpeqdtmtfsdgltlnrtqmhnagfgplt.dlvfafanqll
EAR1_HUMAN 200  lmvrfaslfnvkdqtvmflsrttyslqelgamgmgdll.samfdfsekln

THA1_HUMAN 149  afnlddtevallqavllmstdrsgllcvdkieksqeayllafehyvnhrk
E75A_DROME 153  smnltdaeiglfcaivlitpdrpglrnleliekmysrlkgclqyivaqnr
ROR2_HUMAN 144  smhltedeialfsafvlmsadrswlqekvkieklqqkiqlalqhvlqknh
RRA1_HUMAN 139  plemddaetgllsaiclicgdrqdleqpdrvdmlqepllealkvyvrkrr
EAR1_HUMAN 249  slalteeelglftavvlvsadrsgmensasveqlqetllralralvlknr

THA1_HUMAN 199  hniphfwpkllmkvtdlrmigachasrflhmkvecp.
E75A_DROME 203  pdqpeflaklletmpdlrtlstlhteklvvfrtehke
ROR2_HUMAN 194  redg.iltklickvstlralcgrhteklmafkaiypd
RRA1_HUMAN 189  psrphmfpkmlmkitdlrsisakgaervitlkmeip.
EAR1_HUMAN 299  pletsrftklllklpdlrtlnnmhsekllsfrvdaq.

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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