3cyr_ref1 - reference 1


Name                 Cytochrome c3

Number of sequences              4
Alignment Length                 116
Longest Sequence                 109
Shortest Sequence                95
Average Percent Identity         31
Maximum Percent Identity         38
Minimum Percent Identity         26

Sequence Name    SWISSPROT Accession
cyc3_desde           P00134         
1wad                 P00133         
1cy3                 P00136         
1czj                 P38554         

Family   cyc3_desde 1wad 1cy3 1czj


cyc3_desde   1  ..admvikap...agakvtkaPVAFSHKGHASMDCKTCHHkwDGA.GAIQ
1wad         1  vpadgakidfi..agge.knlTVVFNHSTHKDVKCDDCHHdpGDK..QYA
1cy3         1  ....gmkakpkgdkpga.lqkTVPFPHTKHATVECVQCHHtlEADGGAVK
1czj         1  ..pesvtmspkqfegytpkkgDVTFNHASHMDIACQQCHHtvPDT.YTIE

cyc3_desde  45  PCQASGCHANte.skkgdDSFYMAFHErk..sekSCVGCHKSmkk.....
1wad        46  GCTTDGCHNIldkadksvNSWYKVVHDakggakpTCISCHKDkagddkel
1cy3        46  KCTTSGCHDSlefrdk.aNAKDIKLVEsa..fhtQCIDCHALkkkdkkpt
1czj        48  SCMTEGCHDNik.erteiSSVYRTFHTtkd.sekSCVGCHRElkrqgpsd

cyc3_desde  87  ..GPTKC..TECH...
1wad        96  kkKLTGCKGSACHp..
1cy3        93  ..GPTAC..GKCHttn
1czj        96  ..APLAC..NSCHvq.

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

Back to Index