1ajsA_ref1 - reference 1


Name                 aminotransferase						

Number of sequences              4
Alignment Length                 447
Longest Sequence                 387
Shortest Sequence                358
Average Percent Identity         14
Maximum Percent Identity         22
Minimum Percent Identity         10

Sequence Name    SWISSPROT Accession
1ajsA                P00503         
2dkb                 P16932         
2gsaA                P24630         
1ax4A                P28796         

Family   1ajsA 2dkb 2gsaA 1ax4A


1ajsA        1  lPVVRKVEQRIAnnsslnheylp..ilglaeFRTCASRLAlgddspalqe
2dkb         1  hPEIVSVIGEYAgk..ldhlfsemlsrpvvdLATRLANITppg.......
2gsaA        1  hPEVIEALKVAMek...gtsfga..pcalenVLAEMVNDAvp........
1ax4A        1  amsdhqwaamitgde....ayag..srnyydLKDKAKELFn.........

1ajsA       49  krvggvqslgGTGALRIGAEFLARWyngtnnkdtPVYVss..ptWENHNG
2dkb        42  .ldralllstGAESNEAAIRMAKLVtg.....kyEIVGfaqswhGMTGAA
2gsaA       38  siemvrfvnsGTEACMAVLRLMRAYtg.....rdKIIKfegcyhGHADMF
1ax4A       36  .ydyiipahqGRGAENILFPVLLKYkqkegkaknPVFIsn..fhFDTTAA

1ajsA       97  vftta............gfkdirsyrywdtekr.......glDLQGFLSD
2dkb        86  asatysagrkgvgpaavgsfaipapftyrprferngaydylaELDYAFDL
2gsaA       83  lvk......agsgvatlglpsspgvpkkttantlttpy...nDLEAVKAL
1ax4A       83  hveln............gckainivtekafdsetyddwkgdfDIKKLKEN

1ajsA      128  LEnap..eFSIFVLHACAhnptgtdpt..peqwkqIASVMKRRFLFPFFD
2dkb       136  IDrqssgnLAAFIAEPIL..ssggiielpdgymaaLKRKCEARGMLLILD
2gsaA      124  FAenp.geIAGVILEPIV..gnsgfivpdagflegLREITLEHDALLVFD
1ax4A      121  IAqhgadnIVAIVSTVTCn.saggqpv.smsnlkeVYEIAKQHGIFVVMD

1ajsA      174  SAyqgfasg.....nlekdawairyfvsegf...ELFCAqsfsknfglyn
2dkb       184  EAqtgvgrt.......gtmfacqrdgvtp.....DILTLs...ktlgagl
2gsaA      171  EVmtgfria........yggvqekfgvtp.....DLTTLg...kiigggl
1ax4A      169  SArfcenayfikardpkyknatikevifdmykyaDALTMsa..kxdplln

1ajsA      216  erVGNLtvvakepdsilrvlsqmqkivr.vtwsn.......ppAQGARIV
2dkb       219  .pLAAIvts........aaieerahelgylfyt.thvsdplpaAVGLRVL
2gsaA      205  .pVGAYggk........reimqlvapagpmyqagtlsgnplamTAGIKTL
1ax4A      217  ..IGGLvai.rdneeiftlarqrcvpmegfvtyggla..grdmaamvqgl

1ajsA      258  artlsdpELFHEWTGNVKTMADRILSmrselrarlealktpgtwnhitdq
2dkb       259  dvvqr.dGLVARANVMGDRLRRGLLDlmer..........fdcigdvrgr
2gsaA      246  ellr.qpGTYEYLDQITKRLSDGLLAiaqe.......tghaacggqvs..
1ax4A      262  e.....egteeeylhyrigqvkylgdrlre..........agipiqyptg

1ajsA      308  iGMFSFtgln................pkqVEYLINQKHIyllps......
2dkb       298  .GLLLGveivkdr....rtkepadglgakITRECMNLGLsmniv......
2gsaA      286  .GMFGFfftegpvhnyedakksdlqkfsrFHRGMLEQGIylaps......
1ax4A      297  .GHAVFvdckklvpqipgdqf...paqavINALYLESGVraveigsfllg

1ajsA      336  ...............grinmcg...lttkNLDYVATSIheavtkiqx
2dkb       337  .......qlpgmggvfriappl..tvsedEIDLGLSLLgqaieral.
2gsaA      329  .........qfeagftslah......teeDIDATLAAArtvmsal..
1ax4A      343  rdpatgeqkhadmefmrltiar.rvytndHMDYIADALiglkekfa.

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

Back to Index