1thm_ref1 - reference 1
Name serine protease
Number of sequences 4
Alignment Length 292
Longest Sequence 279
Shortest Sequence 269
Average Percent Identity 50
Maximum Percent Identity 69
Minimum Percent Identity 38
Sequence Name SWISSPROT Accession
1st3 P29599
1sbc P00780
1sbt P00782
2prk P06873
Family 1st3 1sbc 1sbt
Family 2prk
1st3 1 .GQS.VPWGISRVqa.....paahnrgltGSGVKVAVLDTGI.STHPDLn
1sbc 1 .AQT.VPYGIPLIka.....dkvqaqgfkGANVKVAVLDTGIQASHPDLn
1sbt 1 .AQS.VPYGVSQIka.....palhsqgytGSNVKVAVIDSGIDSSHPDLk
2prk 1 aAQTNAPWGLARIsstspgtstyyydesaGQGSCVYVIDTGIEASHPEF.
1st3 43 irggasfvpgepst.qDGNGHGTHVAGTIAALNNSIGVLGVAPSAELYAV
1sbc 44 vvggasfvageayn.tDGNGHGTHVAGTVAALDNTTGVLGVAPSVSLYAV
1sbt 44 vaggasmvpsetpnfqDDNSHGTHVAGTVAALNNSIGVLGVAPSSALYAV
2prk 50 .egraqmvktyyyssrDGNGHGTHCAGTVGS.....RTYGVAKKTQLFGV
1st3 92 KVLGADGRGAISSIAQGLEWagnng.......mhVANLSLGSPSPSATLE
1sbc 93 KVLNSSGSGSYSGIVSGIEWattng.......mdVINMSLGGASGSTAMK
1sbt 94 KVLGDAGSGQYSWIINGIEWaiann.......mdVINMSLGGPSGSAALK
2prk 94 KVLDDNGSGQYSTIIAGMDFvasdknnrncpkgvVASLSLGGGY.SSSVN
1st3 135 QAVNSATSRGVLVVAASGNsga....ssisy.PARYANAMAVGATDQNNN
1sbc 136 QAVDNAYARGVVVVAAAGNsgnsgstntigy.PAKYDSVIAVGAVDSNSN
1sbt 137 AAVDKAVASGVVVVAAAGNegstgssstvgy.PGKYPSVIAVGAVDSSNQ
2prk 143 SAAARLQSSGVMVAVAAGNnna....darnysPASEPSVCTVGASDRYDR
1st3 180 RASFSQYGAGLDIVAPGVNVQSTYPGSTYASLNGTSMATPHVAGAAALVK
1sbc 185 RASFSSVGAELEVMAPGAGVYSTYPTNTYATLNGTSMASPHVAGAAALIL
1sbt 186 RASFSSVGPELDVMAPGVSIQSTLPGNKYGAYNGTSMASPHVAGAAALIL
2prk 189 RSSFSNYGSVLDIFGPGTSILSTWIGGSTRSISGTSMATPHVAGLAAYLM
1st3 230 QKNPSWSNVQIRNHLkntatslgstnl.ygs.glvnaeaatr
1sbc 235 SKHPNLSASQVRNRLsstatylgssfy.ygk.glinveaaaq
1sbt 236 SKHPNWTNTQVRSSLqntttklgdsfy.ygk.glinvqaaaq
2prk 239 TLGKTTAASACR.YIadtankgdlsnipfgtvnllaynnyqa
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
You can also look at the alignment in RSF format, or MSF format
with a Feature Table
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