1pfc_ref1 - reference 1


Name                 immunoglobulin PFc fragment

Number of sequences              5
Alignment Length                 121
Longest Sequence                 116
Shortest Sequence                108
Average Percent Identity         29
Maximum Percent Identity         40
Minimum Percent Identity         25

Sequence Name    SWISSPROT Accession
gc2_cavpo            P01862         
alc_mouse            P01878         
1yuh                 P01726         
1mim                 P01834         
1nld                 P01864         

Family   gc2_cavpo alc_mouse 1yuh 1mim 1nld


gc2_cavpo    1  .ktisktkgaprmPDVYTLPPSRDEL.skskvSVTCLIINFFPADIHVEW
alc_mouse    1  ..tiakvtvntfpPQVHLLPPPSEELlanellSLTCLVRAFNPKEVLVRW
1yuh         1  .tkltvlgqpkssPSVTLFPPSSEEL.etnkaTLVCTITDFYPGVVTVDW
1mim         1  gtkleikr.tvaaPSVFIFPPSDEQL.ksgtaSVVCLLNNFYPREAKVQW
1nld         1  .ttvtvssasttaPSVYPLAPVSGDQ.tnssvTLGCLVKGYFPEPVTLTW

gc2_cavpo   49  as.nrvvsekpeykntppied....adgSYFLYSKLTVDKSAWDQGTVYT
alc_mouse   49  lhgneelspe..sylveplkepgfegatTYLVTSVLRVSAETWKQGDQYS
1yuh        49  kvdgtpvteg..mettqpskq....snnKYMASSYLTLSARAWERHASYS
1mim        49  kvdn.alqsg...nsqesvteqds.kdsTYSLSSTLTLSKADYEKHKVYA
1nld        49  nsg..slssg..vhtfpavlq.....sdLYTLSSSVTVTSSPWPS.ETIT

gc2_cavpo   94  CSVMHealhnhvtqkaisrsp
alc_mouse   97  CMVGHealpmnftqktidrls
1yuh        93  CQVTHeg..htve.kslsra.
1mim        94  CEVTHqglsspvt.ksfnrg.
1nld        89  CNVAHpasstkvdkkieprg.

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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