2abk_ref4 - reference 4


Name                 endonuclease iii

Number of sequences              7
Alignment Length                 660
Longest Sequence                 490
Shortest Sequence                192
Average Percent Identity         26
Maximum Percent Identity         50
Minimum Percent Identity         11

Sequence Name    SWISSPROT Accession
2ABK                 P20625         
END3_RICPR           O05956         
END3_BACSU           P39788         
UVEN_MICLU           P46303         
Y613_METJA           Q58030         
1MPGA                P04395         
Q9ZBF2               Q9ZBF2         

Family   2ABK END3_RICPR END3_BACSU UVEN_MICLU Y613_METJA
Family   1MPGA Q9ZBF2


2ABK         1  ..................................................
END3_RICPR   1  ..................................................
END3_BACSU   1  ..................................................
UVEN_MICLU   1  ..................................................
Y613_METJA   1  ..................................................
1MPGA        1  ..................................................
Q9ZBF2       1  mhtdtercvravqskdarfdgwfftavlttgiycrpscpvvppkpgnmtf

2ABK         1  ..................................................
END3_RICPR   1  ..................................................
END3_BACSU   1  ..................................................
UVEN_MICLU   1  ..................................................
Y613_METJA   1  ..................................................
1MPGA        1  ..................................................
Q9ZBF2      51  ypsaaacqqagfrackrcrpdtspgspewnrradltaramrliadgvvdr

2ABK         1  ..................................................
END3_RICPR   1  ..................................................
END3_BACSU   1  ..................................................
UVEN_MICLU   1  ..................................................
Y613_METJA   1  ..................................................
1MPGA        1  ..................................................
Q9ZBF2     101  egvpglasrlgystrqverqllaelgagplalaraqraqtarlliettpl

2ABK         1  ..................................................
END3_RICPR   1  ..................................................
END3_BACSU   1  ..................................................
UVEN_MICLU   1  ..................................................
Y613_METJA   1  ..................................................
1MPGA        1  .................................................m
Q9ZBF2     151  pmadiafaagfssirtfndtvrevyalspselrtraprnrraatapgals

2ABK         1  ..................................................
END3_RICPR   1  ..................................................
END3_BACSU   1  ..................................................
UVEN_MICLU   1  ..................................................
Y613_METJA   1  ..................................................
1MPGA        2  ytlnwqppydwswmlgflaaravssvetvadsyyarslavgey..rgvvt
Q9ZBF2     201  lrlpfraplnpdnlfghlaatavpgveewrdgayrrtlrlpyghgivalt

2ABK         1  ......................................mnkakrleiltr
END3_RICPR   1  ......................................mqaqimnkifei
END3_BACSU   1  .....................................mlnlkqiefcldk
UVEN_MICLU   1  ........................metestgtptgetrlalvrrarridr
Y613_METJA   1  .........................................melieillk
1MPGA       50  aipd.iarhtlhinlsag.lepvaaeclakmsrlfdlqcnpqivngalgr
Q9ZBF2     251  pnpdhiacrltlsdlrdltvaisrcrrlldldadptaiddqlradpllap

2ABK        13  lren.nphpttel.nfsspFELLIAVLLsaqatdvsvnkataklypvant
END3_RICPR  13  fskn.npkpqtel.iykndFTLLVAVILsaratdisvnlatkhlfetynt
END3_BACSU  14  igdm.fphaecel.vhsnpFELVVAVALsaqctdalvnrvtktlfqkykr
UVEN_MICLU  27  ilaetypyavael.dfetpFELLVATVLsaqttdvrvnaatpalfarfpd
Y613_METJA  10  klnk..navvteiakdkdpFKVLISTIIsartkdevteevskklfkeikd
1MPGA       98  lgaa.rpglrlp..gcvdaFEQGVRAILgqlvsvamaakltarvaqlyge
Q9ZBF2     301  lvdk.apgrrvp..rtvdeAEFAVRAVLgqqvstaaarthaarlvtahgd

2ABK        61  ...............paamlelgvegvktyiktiglynskaeniiktcri
END3_RICPR  61  ...............pekflelgeeglkkyiksiglfnskakniialcqi
END3_BACSU  62  ...............pedylavpleelqqdiksiglyrnkakniqklskm
UVEN_MICLU  76  ...............ahamaaatepelqelvrstgfyrnkasailrlsqe
Y613_METJA  58  ...............vddllnideekladliypagfyknkaknlkklaki
1MPGA      145  rlddfpeyic..fptpqrlaaadpqalkal....gmplkraealihlana
Q9ZBF2     348  pvddpegglthlfpstealaavdpetlamp...rtrrttfttlvahladg

2ABK        96  lleqh.ngevpedraaleal....PGVGRKTAnvvlntafgwptiav.dt
END3_RICPR  96  likny.qtsipnnfkelvkl....PGVGRKTAnvvlnclfamptmav.dt
END3_BACSU  97  iiedy.ggevprdrdelvkl....PGVGRKTAnvvvsvafgvpaiav.dt
UVEN_MICLU 111  lvgrh.dgevparledlval....PGVGRKTAfvvlgnafgqpgitv.dt
Y613_METJA  93  lkeny.ngkvpdsleellkl....PGVGRKTAnlvitlafnkdgicv.dt
1MPGA      189  alegtlpmtipgdveqamktlqtfPGIGRWTAnyfalrgwqakdvflpdd
Q9ZBF2     395  svnpgvesdwaetrarllal....PGFGPWTAdviamralgdpdaflptd

2ABK       140  hifrvcnrtqfapgknveqveekllk.vvpaefkvdchhwlilhgrytci
END3_RICPR 140  hvfrvskriglakgntaaivekellq.iidekwltyahhwlilhgryick
END3_BACSU 141  hvervskrlgicrwkdsvlevektlmrkvpkedwsvthhrliffgryhck
UVEN_MICLU 155  hfgrlarrlgftdetdpgkgrarrgrpvppardwtmlshrlifhgrrvch
Y613_METJA 137  hvhricnrweivdtetpeetefelrk.klpkkywkvinnllvvfgreics
1MPGA      239  ylikqr.....fpgmtpaqirrya......erwkpw.rsyallhiwyteg
Q9ZBF2     441  lgirraaaelglp.stpaaltara......aawrpw.rayavqylwatdd

2ABK       189  arkprcgsci..iedlceykekvdi.........................
END3_RICPR 189  arkpgcnicp..ikeyceyyintfss........................
END3_BACSU 191  aqsprcaecp..llslcregqkrdkkglvkr...................
UVEN_MICLU 205  arrpacgrcp..iarwcpsyaagetdperarallayelkpgreellellr
Y613_METJA 186  sks.kcdkcfkeikekcpyyekikhfenilkkfnfrkvsknkipnekgty
1MPGA      277  wqpdea............................................
Q9ZBF2     483  hpinflpv..........................................

2ABK       212  ..................................................
END3_RICPR 213  ..................................................
END3_BACSU 220  ..................................................
UVEN_MICLU 253  agrtagaagprpraggxapglpaqpfr.......................
Y613_METJA 235  ilkirlkegkkikfgkterffkkgyyfyigsafgnsmnlknrierhlkdd
1MPGA      283  ..................................................
Q9ZBF2     491  ..................................................

2ABK       212  ..................................................
END3_RICPR 213  ..................................................
END3_BACSU 220  ..................................................
UVEN_MICLU 280  ..................................................
Y613_METJA 285  kkmhwhidyllkygkieeiyitnervecevanefikkfdfvenfgcsdck
1MPGA      283  ..................................................
Q9ZBF2     491  ..................................................

2ABK       212  ..........
END3_RICPR 213  ..........
END3_BACSU 220  ..........
UVEN_MICLU 280  ..........
Y613_METJA 335  ckshlfylkp
1MPGA      283  ..........
Q9ZBF2     491  ..........

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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