1mfa_ref4 - reference 4
Name immunoglobulin fab fragment
Number of sequences 8
Alignment Length 495
Longest Sequence 468
Shortest Sequence 117
Average Percent Identity 17
Maximum Percent Identity 42
Minimum Percent Identity 8
Sequence Name SWISSPROT Accession
1mfa P01726
1igtB P01726
1mlcA P01765
1bec P04213
1tcrA P01738
1kb5B P04214
CD4_HUMAN P01730
IL6A_HUMAN P08887
Family 1mfa 1igtB 1fgvH 1bec 1tcrA 1kb5B CD4_HUMAN IL6A_HUMAN
1mfa 1 .........wifgggtkltvlgqgevqvqqsg.tvvarpgasVKMSCkas
1igtB 1 ........................evklqesg.gglvqpggsLKLSCats
1mlcA 1 ........................dieltqspatlsvtpgdsVSLSCras
1bec 1 ..........................avtqsprnkvavtggkVTLSCqqt
1tcrA 1 .........................qsvtqpdarvtvsegasLQLRCkys
1kb5B 1 ........................vtlleqnprwrlvprgqaVNLRCilk
CD4_HUMAN 1 ......mnrgvpfrhlllvlqlallpaatqgkkvvlgkkgdtVELTCtas
IL6A_HUMAN 1 mlavgcallaallaapgaalaprrcpaqevargvltslpgdsVTLTCpgv
1mfa 41 gytftnywmhwikqrpgqglewigaiypgnsatfynhkfraktkltavts
1igtB 26 gftfsdyymywvrqtpekrlewvayisngggstyypdtvkgrftisrdna
1mlcA 27 .qsis.nnlhwyqqkshesprllikyv....sqsssg.ipsrfsgsg...
1bec 25 nn...hnnmywyrqdtghglrlihysyg.agstekgd.ipdgykasrp..
1tcrA 26 ysa..tpylfwyvqyprqglqlllkyys..gdpvvq..gvngfeaefsk.
1kb5B 27 nsq..ypwmswyqqdlqkqlqwlftlrs.pgdkevkslpgadylatrv..
CD4_HUMAN 45 qkk..siqfhwkn...snqikilgnqgs.fltkgpsk.lndradsrrslw
IL6A_HUMAN 51 eped.natvhwvlrkp...............aags...hpsrwagm....
1mfa 91 tttaymelsslt.seDSAVYYCtrgg.....hgyygdywgqgasltvs..
1igtB 76 kntlylqmsrlk.seDTAMYYCarhg.....gyyamdywgqgttvtvssa
1mlcA 67 sgtdftlsinsveteDFGMYFCqqs.......nswprtfgggtkleikra
1bec 68 sqeqfslilelatpsQTSVYFCasgg...grgsyaeqffgpgtrltvled
1tcrA 69 snssfhlrkasvhwsDSAVYFCavsg......fasaltfgsgtkvivlpy
1kb5B 72 tdtelrlqvanm..sQGRTLYCtcsaapdwgasaetlyfgsgtrltvl..
CD4_HUMAN 88 dqgnfpliiknlkieDSDTYICeved...qkeevqllvfg.ltansdthl
IL6A_HUMAN 78 .grrlllrsvql..hDSGNYSCyrag............rpagtvhllvdv
1mfa 133 ..................................................
1igtB 120 ktt..apsvyplapvcgdttg..ssvtlgclvkgyfpepvtltwnsgsls
1mlcA 110 da...aptvsifppsseqlts..ggasvvcflnnfypkdinvkwki....
1bec 115 lrqvtppkvslfepskaeiank.qkatlvclargffpdhvelswwv....
1tcrA 113 iqnpepavyalkdprsqd........stlclftdfdsqinvpktme....
1kb5B 118 ..................................................
CD4_HUMAN 134 lqg.qsltltles.......ppgsspsvqcrspr................
IL6A_HUMAN 113 ppeepqlscfrksplsnvvcewgprstpslttkavllvrkfqnspaedfq
1mfa 133 ..................................................
1igtB 166 sgvhtfpa.vlqsd..........lytlsssvtvtsstwpsq...sitcn
1mlcA 151 dgserqng.vlnswtdqds..kdstysmsstltltkdeyerh..nsytce
1bec 160 ngkevhsg.vstdpqayke..snysyclssrlrvsatfwhnp.rnhfrcq
1tcrA 151 sgtfitdatvldmk.......amdsksngaiawsnq........tsftcq
1kb5B 118 ..................................................
CD4_HUMAN 160 .gkniqggktlsvs...........qlelqdsgt............wtct
IL6A_HUMAN 163 epcqysqesqkfscqlavpegdssfyivsmcvassvgskfsktqtfqgcg
1mfa 133 ..................................................
1igtB 202 vahpas...stkvdkkieprgptikpcppckcpapnllggpsvfifppki
1mlcA 196 athktstspivksfnrnec...............................
1bec 206 vqfhglseedkwpegspkpvtqnisaeawgrad.................
1tcrA 186 difketnatypssdvpc.................................
1kb5B 118 ..................................................
CD4_HUMAN 186 vlqn.....qkkvefkidivvlafqkassivykkegeqvefsfplaftve
IL6A_HUMAN 213 ilqpdppanitvtavarnprwlsvtwqdphswnssfyrlrfelryraers
1mfa 133 ..................................................
1igtB 249 kdvlmislspivtcvvvdvseddpdvqiswfvnnvevhtaqtqthredyn
1mlcA 215 ..................................................
1bec 239 ..................................................
1tcrA 203 ..................................................
1kb5B 118 ..................................................
CD4_HUMAN 231 kltgsgelwwqaerassskswitfdlknkevsvkrvtqdpklqmgkklpl
IL6A_HUMAN 263 ktfttwmvkdlqhhcvihdawsglrhvvqlraqeefgqgewsewspeamg
1mfa 133 ..................................................
1igtB 299 stlrvvsalpiqhqdwmsgkefkckvnnkdlpapiertiskpkgsvrapq
1mlcA 215 ..................................................
1bec 239 ..................................................
1tcrA 203 ..................................................
1kb5B 118 ..................................................
CD4_HUMAN 281 hltlpqalpqyagsgnltlaleaktgklhqevnlvvmratqlqknltcev
IL6A_HUMAN 313 tpwtesrsppaenevstpmqalttnkdddnilfrdsanatslpvqdsssv
1mfa 133 ..................................................
1igtB 349 vyvlpppeeemtkkqvtltcmvtdfmpediyvewtnngktelnykntepv
1mlcA 215 ..................................................
1bec 239 ..................................................
1tcrA 203 ..................................................
1kb5B 118 ..................................................
CD4_HUMAN 331 wgptspklmlslklenkeakvskrekavwvlnpeagmwqcllsdsgqvll
IL6A_HUMAN 363 plptflvaggslafgtllciaivlrfkktwklralkegktsmhppyslgq
1mfa 133 ..................................................
1igtB 399 ldsdgsyfmysklrvekknwvernsyscsvvheglhnhhttksfsr....
1mlcA 215 ..................................................
1bec 239 ..................................................
1tcrA 203 ..................................................
1kb5B 118 ..................................................
CD4_HUMAN 381 esnikvlptwstpvqpmalivlggvaglllfiglgiffcvrcrhrrrqae
IL6A_HUMAN 413 lvperprptpvlvplisppvspsslgsdntsshnrpdardprspydisnt
1mfa 133 ............................
1igtB 445 ............................
1mlcA 215 ............................
1bec 239 ............................
1tcrA 203 ............................
1kb5B 118 ............................
CD4_HUMAN 431 rmsqikrllsekktcqcphrfqktcspi
IL6A_HUMAN 463 dyffpr......................
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
You can also look at the alignment in RSF format, or MSF format
with a Feature Table
Back to Index