1idy_ref3 - reference 3
Name dna binding
Number of sequences 27
Alignment Length 64
Longest Sequence 60
Shortest Sequence 49
Average Percent Identity 19
Maximum Percent Identity 81
Minimum Percent Identity 1
Sequence Name SWISSPROT Accession
1idy P06876
mybp_maize P27898
myb3_maize P20025
gl1_arath P27900
myb3_horvu P20027
myb2_phypa P80073
1hstA P02259
h1d_strpu P15870
h1b_strpu P15869
h1_tigca P35060
h1l_myttr Q05831
h1_echcr P02257
h11_caeel P10771
h1a_pladu P06894
h11_arath P26568
h1_dicdi P54671
1aoy P15282
ARGR_STRCL P95721
G3273713 G3273713
AHRC_BACSU P17893
ARGR_BACST O31408
ARGR_STRPN Q54870
ARGR_MYCTU P94992
1jhgA P03032
TRPR_HAEIN P44889
G3328572 G3328572
1tc3C P34257
Family 1idy mybp_maize myb3_maize gl1_arath myb3_horvu myb2_phypa
Family 1hstA h1d_strpu h1b_strpu h1_tigca h1l_myttr h1_echcr h11_caeel h1a_pladu h11_arath h1_dicdi
Family 1aoy ARGR_STRCL G3273713 AHRC_BACSU ARGR_BACST ARGR_STRPN ARGR_MYCTU
Family 1jhgA TRPR_HAEIN G3328572
Family 1tc3C
1idy 1 mevkktswteeedrILYQAhkrlgnRWAEIAKLLp.........grtdna
mybp_maize 1 advkrgniskeeedIIIKLhatlgnRWSLIASHLp.........grtdne
myb3_maize 1 .dlkrgnftadeddLIVKLhsllgnKWSLIAARLp.........grtdne
gl1_arath 1 .nvnkgnfteqeedLIIRLhkllgnRWSLIAKRVp.........grtdnq
myb3_horvu 1 .dlkrgcfsqqeedHIVALhqilgnRWSQIASHLp.........grtdne
myb2_phypa 1 .dlkrgifseaeenLILDLhatlgnRWSRIAAQLp.........grtdne
1hstA 1 ...shptysemiaaAIRAEksrggsSRQSIQKYIkshykvgh...nadlq
h1d_strpu 1 ...shpkysdmiasALESLkekkgsSRQAILKYVkanftvgd...nanvh
h1b_strpu 1 ...ahpsssemvlaAITALkerggsSAQAIRKYIeknytvdi..kkqaif
h1_tigca 1 ...thpptsvmvmaAIKALkerngsSLPAIKKYIaanykvdv..vknahf
h1l_myttr 1 ....kpstlsmivaAITAMknrkgsSVQAIRKYIlannkgin.tshlgsa
h1_echcr 1 ...ahppvidmitaAIAAQkerrgsSVAKIQSYIaakyrcdi..nalnph
h11_caeel 1 ...ahppyintikeAIKQLkdrkgaSKQAILKFIsqnyklgdnviqinah
h1a_pladu 1 ...ahppvatmvvtAILGLkerkgsSMVAIKKYIaanyrvdv..arlapf
h11_arath 1 ...shptyeemikdAIVTLkertgsSQYAIQKFIeekrkelp..ptfrkl
h1_dicdi 1 ...nhptyqvmistAIAHYkdrtgsSQPAIIKYIeanynvap..dtfktq
1aoy 1 .mrssakqeelvkaFKALLkeekfsSQGEIVAALqeq.gfd...ninqsk
ARGR_STRCL 1 ........marhrrIVDILnrqpvrSQSQLAKLLadn.gls....vtqat
G3273713 1 enlnpvtrtarqalILQILdkqkvtSQVQLSELLlde.gid....itqat
AHRC_BACSU 1 .....mnkgqrhikIREIItsneieTQDELVDMLkqd.gyk....vtqat
ARGR_BACST 1 .....mnkgqrhikIREIImsndieTQDELVDRLrea.gfn....vtqat
ARGR_STRPN 1 .....mrkrdrhqlIKKMIteeklsTQKEIQDRLeah.nvc....vtqtt
ARGR_MYCTU 1 gpevaanragrqarIVAILssaqvrSQNELAALLaae.gie....vtqat
1jhgA 1 .tpderealgtrvrIIEELlrge.mSQRELKNELg..........agiat
TRPR_HAEIN 1 .taderdavglrlqIVSQLidkn.mPQREIQQNLn..........tsaat
G3328572 1 .sfserkdvasryhIIRALlege.lTQREIAEKYg..........vsiaq
1tc3C 1 ....rgsalsdterAQLDVmkllnvSLHEMSRKIs..........rsrhc
1idy 42 IKNHWNSTmrrkv.
mybp_maize 42 IKNYWNSHlsrq..
myb3_maize 41 IKNYWNTHvrrk..
gl1_arath 41 VKNYWNTHlskk..
myb3_horvu 41 IKNFWNSCikkk..
myb2_phypa 41 IKNYWNTRlkkr..
1hstA 45 IKLSIRRLlaagv.
h1d_strpu 45 IKQALKRGvtsgq.
h1b_strpu 46 IKRALITGvekgt.
h1_tigca 46 IKKALKSLvekkk.
h1l_myttr 46 MKLAFAKGlksgv.
h1_echcr 46 IRRALKNQvksga.
h11_caeel 48 HRQALKRGvtska.
h1a_pladu 46 IRKFIRKAvkqtkg
h11_arath 46 LLLNLKRLvasgk.
h1_dicdi 46 LKLALKRLvakgt.
1aoy 46 VSRMLTKFgavrt.
ARGR_STRCL 38 LSRDLDELgavki.
G3273713 46 LSRDLDELgarkv.
AHRC_BACSU 41 VSRDIKELhlvkv.
ARGR_BACST 41 VSRDIKEMqlvkv.
ARGR_STRPN 41 LSRDLREIgltkv.
ARGR_MYCTU 46 LSRDLEELgavkl.
1jhgA 39 ITRGSNSLkaapv.
TRPR_HAEIN 39 ITRGSNMIktmdp.
G3328572 39 ITRGSNALkgldp.
1tc3C 37 IRVYLKDPvsygt.
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
You can also look at the alignment in RSF format, or MSF format
with a Feature Table
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