1ad2_ref1 - reference 1


Name                 ribosomal protein l1				

Number of sequences              4
Alignment Length                 221
Longest Sequence                 213
Shortest Sequence                203
Average Percent Identity         31
Maximum Percent Identity         36
Minimum Percent Identity         27

Sequence Name    SWISSPROT Accession
rk1_cyapa            P48125         
rl1_metja            P54050         
rl1_halvo            P41199         
rl1_sulso            P96038         

Family   rk1_cyapa rl1_metja rl1_halvo rl1_sulso


rk1_cyapa    1  .eeqlyepleaiqllkqistakFIETVEVHCRL.GIDPKYNDQQLRATVT
rl1_metja    1  .......vkearelakp...rnFTQSFEFIATLKEIDMRKPENRIKTEVV
rl1_halvo    1  .......vdavsraldeapgrnFRETVDLAVNLRDLDLNDPSKRVDESIV
rl1_sulso    1  dkesliealklalsteynvkrnFTQSVEIILTFKGIDMKKGDLKLREIVP

rk1_cyapa   49  LPNGTGQTLRVAVITRGEkineastagadlvga.eelideiqngr.....
rl1_metja   41  LPHGRGKEAKIAVIGTGDlakqaeelgltvirk.eei.eelgknkrklrk
rl1_halvo   44  LPSGTGQDTQIVVFATGEt..aaedaadevlgp.del.edfgddtdaakd
rl1_sulso   51  LPKQPSKAKRVLVVPSSEqleyakkaspkvvitreel.qklqgqkrpvkk

rk1_cyapa   93  ..ldfDCLIATPDMMPQVAK.LGRVLGPRGLMPSPKGGTVTfdlaQAIND
rl1_metja   89  iakahDFFIAQADLMPLIGRYMGVILGPRGKMPKPVPANA..nikPLVER
rl1_halvo   90  ladetDFFVAEAGLMQDIGRYLGTVLGPRGKMPTPLQPDD..dvvETVNR
rl1_sulso  100  laiqnEWFLINQESMALAGRILGPALGPRGKFPTPLPNTA..disEYINR

rk1_cyapa  140  FKAGKLEFRNDrtgiVHVLFGKANFSEEALLGNLKAVQEavdrnrpsgvk
rl1_metja  137  LKKTVVINTRDkp.yFQVLVGNEKMTDEQIVDNIEAVLNvva...kkyek
rl1_halvo  138  MKNTVQLRSRDrr.tFHTRVGADDMTPDEIAENIDVIVRrle...atlek
rl1_sulso  148  FKRSVIVKTKDqp.qVQVFIGTEDMKPEDLAENAIAVLNaie....nkak

rk1_cyapa  190  gky.wKSIYITSTMSPSIEVd
rl1_metja  183  glyhiKDAYVKLTMGPAVKVk
rl1_halvo  184  gplniDSVYVKTTMGPSVEV.
rl1_sulso  193  vetnlRNIYVKTTMGKAVKVk

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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