1ycc_ref4 - reference 4
Name cytochrome c
Number of sequences 9
Alignment Length 234
Longest Sequence 190
Shortest Sequence 105
Average Percent Identity 36
Maximum Percent Identity 57
Minimum Percent Identity 21
Sequence Name SWISSPROT Accession
1ycc P00044
1ccr P00055
1cry P00083
1hro P00080
2c2c P00092
155c P00096
1c2r P00094
1cxa P00095
1etp Q52369
Family 1ycc 1ccr 1cry 1hro 2c2c 155c 1c2r 1cxa
Family 1etp
1ycc 1 ...tefkaGSAKKGATLFktrCLQCHtv..ekgg.....phkvgpnlhgi
1ccr 1 asfseappGNPKAGEKIFktkCAQCHtv..dkga.....ghkqgpnlngl
1cry 1 ........QDAASGEQVFk.qCLVCHsi..gpga.....knkvgpvlngl
1hro 1 ....sappGDPVEGKHLFhtiCITCHtd..ikga......nkvgpslygv
2c2c 1 .......eGDAAAGEKVSk.kCLACHtf..dqgg.....ankvgpnlfgv
155c 1 ......neGDAAKGEKEFn.kCKACHmiqapdgtdi..kggktgpnlygv
1c2r 1 ........GDAAKGEKEFn.kCKTCHsiiapdgteiv.kgaktgpnlygv
1cxa 1 ......qeGDPEAGAKAFn.qCQTCHvivddsgttiagrnaktgpnlygv
1etp 1 .......aGDAEAGQGKVa.vCGACHgv...dgns....papnfpklag.
1ycc 41 fgrhsgqaegys.ytdanikkn.....vlwdennmseyltnpkkyipg..
1ccr 44 fgrqsgttpgys.ystadknma.....viweentlydyllnpkkyipg..
1cry 35 fgrhsgtiegfa.ysdanknsg.....itwteevfreyirdpkakipg..
1hro 39 vgrhsgiepgyn.yseaniksg.....ivwtpdvlfkyiehpqkivpg..
2c2c 36 fentaahkdnya.ysesytemkakg..ltwteanlaayvknpkafvleks
155c 42 vgrkiaseegfk.ygegilevaeknpdltwteanlieyvtdpkplvkkmt
1c2r 41 vgrtagtypefk.ykdsivalgasg..fawteediatyvkdpgaflkekl
1cxa 44 vgrtagtqadfkgygegmkeagakg..lawdeehfvqyvqdptkflkeyt
1etp 35 ..........................qgeryllkqlqdikag..stpgap
1ycc 83 .......tkmafg.glkkekdrNDLITYLKKace................
1ccr 86 .......tkmvfp.glkkpqerADLISYLKEats................
1cry 77 .......tkmifa.gvkdeqkvSDLIAYIKQfnadgsk............
1hro 81 .......tkmgyp.gqpdpqkrADIIAYLETlk.................
2c2c 83 gdpkak.skmtfk..ltkddeiENVIAYLKTlk.................
155c 91 ddkgak.tkmtf....kmgknqADVVAFLAQddpda..............
1c2r 88 ddkkak.tgmaf....klakggEDVAAYLASvvk................
1cxa 92 gdakak.gkmtfk..lkkeadaHNIWAYLQQvavrp..............
1etp 57 egvgrkvlemtgmldplsdqdlEDIAAYFSSqkgsvgyadpalakqgekl
1ycc 109 ..................................................
1ccr 112 ..................................................
1cry 107 ..................................................
1hro 106 ..................................................
2c2c 113 ..................................................
155c 122 ..................................................
1c2r 117 ..................................................
1cxa 125 ..................................................
1etp 107 frggkldqgmpactgchapngvgndlagfpklggqhaaytakqltdfreg
1ycc 109 ..................................
1ccr 112 ..................................
1cry 107 ..................................
1hro 106 ..................................
2c2c 113 ..................................
155c 122 ..................................
1c2r 117 ..................................
1cxa 125 ..................................
1etp 157 nrtndgdtmimrgvaaklsnkdiealssyiqglh
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
You can also look at the alignment in RSF format, or MSF format
with a Feature Table
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