1bbt3_ref1 - reference 1
Name foot-and-mouth disease virus
Number of sequences 5
Alignment Length 233
Longest Sequence 192
Shortest Sequence 168
Average Percent Identity 14
Maximum Percent Identity 24
Minimum Percent Identity 7
Sequence Name SWISSPROT Accession
1bbt3 P03305
1aym3 Q82122
1bbt2 P03305
1aym1 Q82122
1bbt1 P03305
Family 1bbt3 1aym3 1bbt2
Family 1aym1
Family 1bbt1
1bbt3 1 ..ftnlldvaeacptflrfe........ggvpyvttk.tds..drvlaqF
1aym3 1 ..vknliemcqv.dtlipinstqsnignvsmytvtls.pqtklaeeifaI
1bbt2 1 gletrvvqa....erffkth............lfdwvtsdsf.grc.hlL
1aym1 1 ..emsvesfl...grsgcih..........esvldiv..dnyndqsftkW
1bbt1 1 .qhtdvsfimd.rfvkvtpqn..........................qiN
1bbt3 38 DMSLaakhmsntfLAGLAQYYTQYSGTINLHFmftgpt....dakarymV
1aym3 47 KVDIashplattlIGEIASYFTHWTGSLRFSFmfcgta....nttlkvlL
1bbt2 33 ELPTdhk....gvYGSLTDSYAYMRNGWDVEVtavgnq....fnggcllV
1aym1 34 NINLqem....aqIRRKFEMFTYARFDSEITMvpsvaakdghighivmqY
1bbt1 23 ILDLmqvp.shtlVGGLLRASTYYFSDLEIAVkheg............dL
1bbt3 84 AYAPPGMEpp..ktpeaaahci..haewdtglnSKFTFSIPYLSAADYty
1aym3 93 AYTPPGIGkp..rsrkeamlgt..hvvwdvglqSTVSLVVPWISASQYrf
1bbt2 75 AMVPELCSiq.krelyqltlfp..hqfinprtnMTAHITVPFVGVNRYdq
1aym1 80 MYVPPGAPipttrddyawqsgtnasvfwqhg.qPFPRFSLPFLSIASAyy
1bbt1 60 TWVPNGAP.....ekaldnt.tnptayhk...aPLTRLALPYTAPHRVla
1bbt3 130 tas..........................dvaettnvqGWVCLfqithg.
1aym3 139 ttp.............................dtyssaGYITCwyqtnfv
1bbt2 122 ykv................................hkpWTLVVmvvaplt
1aym1 129 mfydgy...............dgdtyksrygtvvtndmGTLCSrivt...
1bbt1 101 tvyngecrysrnavpnlrgdlqvlaqkvartlptsfnyGAIKAt......
1bbt3 153 ....kadgdalvvlasagkdfelrlpvdarae.
1aym3 160 vppntpntaemlcfvsgckdfclrmardtdlhk
1bbt2 140 vntegapqikvyaniapt.nvhvagefpske..
1aym1 161 .seqlhkvkvvtriyhkakhtkawcprppravq
1bbt1 145 ........rvtellyrm.kraetycprpllaih
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
You can also look at the alignment in RSF format, or MSF format
with a Feature Table
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