1wit_ref1 - reference 1


Name                 twitchin		

Number of sequences              5
Alignment Length                 113
Longest Sequence                 106
Shortest Sequence                89
Average Percent Identity         17
Maximum Percent Identity         22
Minimum Percent Identity         14

Sequence Name    SWISSPROT Accession
1wit                 Q23550         
1tlk                 P56276         
2ncm                 P13596         
1hnf                 P06729         
1vcaA                P19320         

Family   1wit 1tlk 2ncm 1hnf 1vcaA


1wit         1  .lkpkiltasrkikikaGFTHNLEVDFIGa..pdPTATWtvg..dsgaal
1tlk         1  hvkpyftktildmdvveGSAARFDCKVEGy..pdPEVMWfkd..dnpvke
2ncm         1  .rvlqvdivpsqgeisvGESKFFLCQVAGda.kdKDISWfsp.ngeklsp
1hnf         1  .avskeitnaletwgalGQDINLDIPSFQmsddiDDIKWektsdkkkiaq
1vcaA        1  ..fkiettpesrylaqiGDSVSLTCSTTGc..esPFFSWrtq.idspln.

1wit        46  ..........apellvdaks.sTTSIFFPSAKRADSGNYKLKVKNElge.
1tlk        47  ..........srhfqidydeegNCSLTISEVCGDDDAKYTCKAVNSlge.
2ncm        48  .........nqqrisvvwndddSSTLTIYNANIDDAGIYKCVVTAEdgtq
1hnf        50  frkeketfkekdtyklfk....NGTLKIKHLKTDDQDIYKVSIYDTkgkn
1vcaA       45  .............gkvtneg.tTSTLTMNPVSFGNEHSYLCTATCEsrk.

1wit        84  .deAIFEVIVq..
1tlk        86  .atCTAELLVetm
2ncm        89  .seATVNVKIfq.
1hnf        96  vleKIFDLKIq..
1vcaA       80  .leKGIQVEIy..

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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