1pfc_ref4 - reference 4
Name immunoglobulin PFc fragment
Number of sequences 10
Alignment Length 378
Longest Sequence 362
Shortest Sequence 111
Average Percent Identity 19
Maximum Percent Identity 41
Minimum Percent Identity 10
Sequence Name SWISSPROT Accession
1pfc P01862
1ige P01854
1yuh P01726
1mim P01834
1nld P01864
1frt P07151
1mcp P01789
1iea P04230
CD11_MOUSE P11609
1B04_HUMAN P30460
Family 1pfc 1ige 1yuh 1mim 1nld 1frt 1mcp 1iea CD11_MOUSE 1B04_HUMAN
1pfc 1 ..................................................
1ige 1 ..................................................
1yuh 1 ..................................................
1mim 1 ..................................................
1nld 1 ..................................................
1frt 1 ......................aeprlplmyhlaavsdlstglpsfwatg
1mcp 1 ..................................................
1iea 1 ..................................................
CD11_MOUSE 1 .mrylpwlllwaflqvwgqseaqqknytfrclqms.sfanrswsrtdsvv
1B04_HUMAN 1 mlvmaprtvllllsaalaltetwagshsmryfdtamsrpgrgeprfisvg
1pfc 1 ..................................................
1ige 1 ..................................................
1yuh 1 .................................avvtq.esalttspget
1mim 1 ................................qivstqspaimsaspgek
1nld 1 .................................qvklq.qsgpglvqpsq
1frt 29 wlgaqqyltynnlrqe..adpcgawiwenqvswywek....ettdlkske
1mcp 1 .................................evklv.esggglvqpgg
1iea 1 ........................................gkkvitafne
CD11_MOUSE 49 wlgdlqthrwsndsat..isftkpwsqgklsnqqweklqhmfqvyrvsft
1B04_HUMAN 51 yvddtqfvrfdsdaaspreeprapwie.qegpeywdrntqifktntqtd.
1pfc 1 ..................................................
1ige 1 ...............................................nhs
1yuh 17 vtltcrsstgavttsnyanwvqekpdrlftgli........ggtnnrgpg
1mim 19 vtmtcsasss....rsymqwyqqkpgtspkrwi........ydtsklasg
1nld 17 slsitctvsgfsltcygvhwvrqspgkgle.wlgviws...ggdtdynaa
1frt 73 qlfleairtlenqin.gtftlqgllgcelapdnsslptav.falngeefm
1mcp 17 slrlscatsgftfsdfymewvrqppgkrle.wiaasrnkgnkytteysas
1iea 11 glkggggslvgggsggggsrpwfleycksechfyngtqrvrllvryfynl
CD11_MOUSE 97 rdiqelvkmmspked.ypieiqlsagcemypgnasesflh.vafqgkyvv
1B04_HUMAN 99 reslrnlrgyynqseagshtlqsmygcdvgpdgrllrghnqyaydgkdyi
1pfc 1 ..................................................
1ige 4 trkeekqrngtltvtstlpvgtrdwiegetyqcr.....vthphlpralm
1yuh 59 vparfsgs..ligdkaaltitgaqtedeaiyfca....lwysnhwvfggg
1mim 57 vparfsgs..gsgtsysltissmeaedaatyych......qrssytfggg
1nld 63 fisrlsitkdnsksqvffkmnslqpndraiyyca......rrggdfwgqg
1frt 121 rfnprtgnwsgewpetdivgnlwmkqpeaarkes.eflltscperllghl
1mcp 66 vkgrfivsrdtsqsilylqmnalraedtaiyycarnyygstwyfdvwgag
1iea 61 eenlrfdsdvgefravtelgrpd.aenwnsqpefleqkraevdtvcrhny
CD11_MOUSE 145 rfwgtswqtvpgapswldlpikvlnadqgtsatvqmllndtcplfvrgll
1B04_HUMAN 149 alnedlrswtaadtaaqitqrkweaarvaeqdra..ylegtcvewlrryl
1pfc 1 rtiskakgppri.pevyllppprnelskkkvsLTCMITGFYP.adINVEW
1ige 49 rsttktsgpraa.pevyafatpewpgsrdkrtLACLIQNFMP.edISVQW
1yuh 103 tkltvlgqpkss.psvtlfppsseeletnkatLVCTITDFYP.gvVTVDW
1mim 99 tkleikrtvaa..psvfifppsdeqlksgtasVVCLLNNFYP.reAKVQW
1nld 107 ttvtvssastta.psvyplapvsgdqtnssvtLGCLVKGYFP.epVTLTW
1frt 170 ergrqnlewkep.psmrlkarp...gnsgssvLTCAAFSFYP.peLKFRF
1mcp 116 ttvtvssesarn.ptiypltlppa.lssdpviIGCLIHDYFPsgtMNVTW
1iea 110 eifdnflvprrveptvtvyptktq.plehhnlLVCSVSDFYP.gnIEVRW
CD11_MOUSE 195 eagksdlekqek.pvawlssvps..sadghrqLVCHVSGFYP.kpVWVMW
1B04_HUMAN 197 engkdtleradp.pkthvthhp...isdheatLRCWALGFYP.aeITLTW
1pfc 49 ds..sepsd...ykntppvfdtdgsFFLYSRLKVdtdawnngesFTCSVM
1ige 97 lhnevqlpda.rhsttqprktkgsgFFVFSRLEVtraeweqkdeFICRAV
1yuh 151 kvdgtpvteg..mettqpskqsnnkYMASSYLTLsarawerhasYSCQVT
1mim 146 kv.dnalqsgnsqesvteqdskdstYSLSSTLTLskadyekhkvYACEVT
1nld 155 ns..gslssg..vhtfpavlqsd.lYTLSSSVTVtsspw.psetITCNVA
1frt 215 lr..nglasg..sgncstgpngdgsFHAWSLLEVkrgd...ehhYQCQVE
1mcp 164 gksgkdit....tvnfppalasggrYTMSNQLTLpavecpegesVKCSVQ
1iea 158 frngkeektg..ivstglvrngdwtFQTLVMLETvpqs...gevYTCQVE
CD11_MOUSE 241 mr.gdqeqqg..thrgdflpnadetWYLQATLDVeage...eagLACRVK
1B04_HUMAN 242 qrdgedqtqd..telvetrpagdrtFQKWAAVVVpsge...eqrYTCHVQ
1pfc 94 HEal.pnhviqksisrspg...............................
1ige 146 HEaaspsqtvqravsvnpgk..............................
1yuh 199 HEg....htvekslsra.................................
1mim 195 HQgl..sspvtksfnrge................................
1nld 199 HPas..stkvdkkieprgc...............................
1frt 258 HEgl..aqpltvdl....................................
1mcp 210 HDsn.pvqeldvnc....................................
1iea 203 HPsl..tdpvtvew....................................
CD11_MOUSE 285 HSsl.ggqdiilywd.arqa...pvglivfivlimlvvvgavvyyiwrrr
1B04_HUMAN 287 HEgl..pkpltlrwepssqstvpivgivaglavlavvvigavvaavmcrr
1pfc 112 ............................
1ige 166 ............................
1yuh 212 ............................
1mim 211 ............................
1nld 216 ............................
1frt 270 ............................
1mcp 223 ............................
1iea 215 ............................
CD11_MOUSE 330 sayqdir.....................
1B04_HUMAN 335 kssggkggsysqaacsdsaqgsdvslta
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
You can also look at the alignment in RSF format, or MSF format
with a Feature Table
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