Tcl/Tk Extensions.
During the development of Ordalie,
I had to create some extensions that can be reused in other context.
You will find here a brief description of these extensions and their
related source code or compiled version if available.
biotext :
Biotext is a C Tk widget aimed to quickly display and scroll a big
matrix of tagged characters. Its needs came from the slowness of the Tk
core text widget when displaying 5000 tagged characters (both
foreground and background) out of a matrix of 500x2000 characters. This
sort of matrix is typically encountered nowadays in Multiple Alignment
of Sequences (protein or Nucleic Acids). Although alignment
programs are more and more accurate for performing the alignment, it
remains necessary to adjust manually their outputs.
- download sources/binaries :
- documentation in HTML
tclcluspack :
tclcluspack is the Tcl version of the cluspack program written by
Nicolas Wicker. Cluspack allows the clustering of protein sequence
alignments or set of points in a multi-variable space. Several
clustering methods are available, as well as several algorithmm for the
automatic determination of the number of clusters.
- download sources/binaries :
- documentation in HTML
tsurf :
tsurf computes from a set of points the isosurface associated with, and
outputs the list of triangles and the list of normals needed to display
it.
- download sources/binaries :
- documentation in HTML
tclfastme :
tclfastme is the tcl version of the FastME program developp by O.
Gascouelle.
- download sources/binaries :
- documentation in HTML
Mise à Jour : 25/04/2011 [string map
{# @} luc.moulinier#igbmc.fr]