gscope_cilio.tcl Annotations

Procedure Detail

AamForCilioPathyGenes

proc AamForCilioPathyGenes {  }

Defined in:

gscope_cilio.tcl, line 131

BilanCilio

proc BilanCilio { {Qui {}} {Quoi {}} }

Defined in:

gscope_cilio.tcl, line 2898

BilanCilio2014

proc BilanCilio2014 { {Qui {}} {Quoi {}} }

Defined in:

gscope_cilio.tcl, line 2692

BilanCilioQds

proc BilanCilioQds { {Qui {}} {Quoi {}} }

Defined in:

gscope_cilio.tcl, line 2871

BonneEntetePourBilanCilio

proc BonneEntetePourBilanCilio { Header }

Defined in:

gscope_cilio.tcl, line 2649

CilioCartaDb

proc CilioCartaDb { {Qui {}} {Quoi {}} {Value {}} {GetWhat {}} }

Defined in:

gscope_cilio.tcl, line 2120

CilioCartaDir

proc CilioCartaDir {  }

Defined in:

gscope_cilio.tcl, line 1014

CilioCartaProject

proc CilioCartaProject { {Qui {}} {Quoi {}} }

Defined in:

gscope_cilio.tcl, line 156

CilioCartaVersion

proc CilioCartaVersion {  }

Defined in:

gscope_cilio.tcl, line 1010

CilioDesc

proc CilioDesc { {Qui {}} {Quoi {}} }

Defined in:

gscope_cilio.tcl, line 1018

CilioMapping

proc CilioMapping { {Qui {}} {Quoi {}} }

Defined in:

gscope_cilio.tcl, line 1037

CilioPathyGenes

proc CilioPathyGenes { {Qui {}} {Quoi {}} }

Defined in:

gscope_cilio.tcl, line 65

CilioPathyGenesOLD

proc CilioPathyGenesOLD { {Qui {}} {Quoi {}} }

Defined in:

gscope_cilio.tcl, line 99

CilioPep

proc CilioPep { {Qui {}} {Quoi {}} }

Defined in:

gscope_cilio.tcl, line 1077

CladeContent

proc CladeContent { Clade {UseQds {}} {WithoutTaxIds {}} }

Defined in:

gscope_cilio.tcl, line 2875

CompareOrganismFromOrthoInspectorAndYannis

proc CompareOrganismFromOrthoInspectorAndYannis {  }

Defined in:

gscope_cilio.tcl, line 1240

CompareOrganismsOiYannis

proc CompareOrganismsOiYannis {  }

Defined in:

gscope_cilio.tcl, line 694

CorrigeLesDescriptifs

proc CorrigeLesDescriptifs {  }

Defined in:

gscope_cilio.tcl, line 951

CorrigeLesDescriptifsEnSupprimantRootEtCellularOrganism

proc CorrigeLesDescriptifsEnSupprimantRootEtCellularOrganism {  }

Defined in:

gscope_cilio.tcl, line 923

CreatePdbFromSeqResAndProtName

proc CreatePdbFromSeqResAndProtName { {Sortie {}} }

Defined in:

gscope_cilio.tcl, line 2639

CreeBlastDatabasesWithOrthoinspectorProteomes

proc CreeBlastDatabasesWithOrthoinspectorProteomes {  }

Defined in:

gscope_cilio.tcl, line 267

CreeProjetGscopeCilioCarta

proc CreeProjetGscopeCilioCarta {  }

Defined in:

gscope_cilio.tcl, line 1232

CreeUneBanqueBlastAvecOrthoInspector

proc CreeUneBanqueBlastAvecOrthoInspector { {LesOsChoisis {}} {Banque {}} {Separate {}} }

Defined in:

gscope_cilio.tcl, line 2033

CreeUneBanqueBlastAvecYannis

proc CreeUneBanqueBlastAvecYannis { {LesOsChoisis {}} {Banque {}} {Separate {}} }

Defined in:

gscope_cilio.tcl, line 1946

CreeUneBanqueBlastPAL

proc CreeUneBanqueBlastPAL { {LesOsChoisis {}} {Banque {}} {Dir {}} }

Defined in:

gscope_cilio.tcl, line 1863

FastaForBlast

proc FastaForBlast { {Qui {}} {Quoi {}} {FastaFile {}} {NewFastaFile {}} }

Defined in:

gscope_cilio.tcl, line 2151

FromOrthoInspector

proc FromOrthoInspector { {Qui {}} {Quoi {}} }

Defined in:

gscope_cilio.tcl, line 1449

FromYannis

proc FromYannis { {Qui {}} {Quoi {}} }

Defined in:

gscope_cilio.tcl, line 1649

InformeCilioCarta

proc InformeCilioCarta {  }

Defined in:

gscope_cilio.tcl, line 1215

InformeIdOiAndAcOiPourTous

proc InformeIdOiAndAcOiPourTous {  }

Defined in:

gscope_cilio.tcl, line 465

InformeIdRefAndAcRefPourTous

proc InformeIdRefAndAcRefPourTous {  }

Defined in:

gscope_cilio.tcl, line 513

InformeIdYaAndAcYaPourTous

proc InformeIdYaAndAcYaPourTous {  }

Defined in:

gscope_cilio.tcl, line 374

InformeIdYaRefAndAcYaRefPourTous

proc InformeIdYaRefAndAcYaRefPourTous {  }

Defined in:

gscope_cilio.tcl, line 423

InformeParProtemblPourTous

proc InformeParProtemblPourTous { {DoIt {}} }

Defined in:

gscope_cilio.tcl, line 1168

InventOi

proc InventOi { {Qui {}} {Quoi {}} {Defaut {}} }

Defined in:

gscope_cilio.tcl, line 190

MajOiProteomes

proc MajOiProteomes { {TaxId {}} }

Defined in:

gscope_cilio.tcl, line 445

MajYaProteomes

proc MajYaProteomes { {TaxId {}} }

Defined in:

gscope_cilio.tcl, line 354

OiLesTFAsDesOrthologs

proc OiLesTFAsDesOrthologs { {Query {}} {OrgaList {}} {Quoi {}} }

Defined in:

gscope_cilio.tcl, line 838

OiName

proc OiName { {Qui {}} {Quoi {}} }

Defined in:

gscope_cilio.tcl, line 200

OiOrgaList

proc OiOrgaList { {GetWhat {}} }

Defined in:

gscope_cilio.tcl, line 893

OiOrganism

proc OiOrganism { {Qui {}} {Quoi {}} }

Defined in:

gscope_cilio.tcl, line 775

OiOrthologsFromCilioCarta

proc OiOrthologsFromCilioCarta { Query {Action {}} {OrganismList {}} }

Defined in:

gscope_cilio.tcl, line 623

OrganismFromOrthoInspector

proc OrganismFromOrthoInspector { {Qui {}} {Quoi {}} }

Defined in:

gscope_cilio.tcl, line 1260

OrganismFromYannis

proc OrganismFromYannis { {Qui {}} {Quoi {}} }

Defined in:

gscope_cilio.tcl, line 1358

OrganismListForCilioCode

proc OrganismListForCilioCode { {GetWhat {}} }

Defined in:

gscope_cilio.tcl, line 858

PABsDuIdOuAc

proc PABsDuIdOuAc { IdOuAc {Science {}} }

Defined in:

gscope_cilio.tcl, line 601

PdbInfo

proc PdbInfo { {Qui {}} {Quoi {}} }

Defined in:

gscope_cilio.tcl, line 2528

PdbSeqRes

proc PdbSeqRes { {Qui {}} {Quoi {}} }

Defined in:

gscope_cilio.tcl, line 2598

RajouteCrEnFinDeFasta

proc RajouteCrEnFinDeFasta {  }

Defined in:

gscope_cilio.tcl, line 1850

RajouteEnFinDeEnteteFasta

proc RajouteEnFinDeEnteteFasta { {FichierFastaIn {}} {Fin {}} {FichierFastaOut {}} {Clean {}} }

Defined in:

gscope_cilio.tcl, line 281

RajouteOXDansBanqueOrthoinspector

proc RajouteOXDansBanqueOrthoinspector { {Qui {}} }

Defined in:

gscope_cilio.tcl, line 326

RajouteOXDansEnteteFasta

proc RajouteOXDansEnteteFasta { {FichierFastaIn {}} {OX {}} {FichierFastaOut {}} }

Defined in:

gscope_cilio.tcl, line 315

SelectClade

proc SelectClade { {Multiple {}} {UseQds {}} }

Defined in:

gscope_cilio.tcl, line 2827

StatFromFasta

proc StatFromFasta { {Qui {}} {Quoi {}} {FastaFile {}} {StatFile {}} {ProcessAlsoId {}} }

Defined in:

gscope_cilio.tcl, line 2378

TailleDeLaBanque

proc TailleDeLaBanque { Banque }

Defined in:

gscope_cilio.tcl, line 1001

UniprotHistory

proc UniprotHistory { {Qui {}} {Quoi {}} }

Defined in:

gscope_cilio.tcl, line 534

VerifieLeFasta

proc VerifieLeFasta { Fichier }

Defined in:

gscope_cilio.tcl, line 976

YannisOrganism

proc YannisOrganism { {Qui {}} {Quoi {}} }

Defined in:

gscope_cilio.tcl, line 712