gscope_collection.tcl Annotations

Procedure Detail

AdnFictifPourCollection

proc AdnFictifPourCollection { {Liste {}} {Rep {}} {Zoom {}} {GetWhat {}} {Max {}} }

Defined in:

gscope_collection.tcl, line 1317

AfficheAssocie

proc AfficheAssocie { Source CoRepertoire {Maniere {}} }

Defined in:

gscope_collection.tcl, line 7175

AfficheGenscanDuContig

proc AfficheGenscanDuContig { Selection }

Defined in:

gscope_collection.tcl, line 3505

AfficheLesSortiesDuBallast

proc AfficheLesSortiesDuBallast { FichierBlastP {Quoi rsf} }

Defined in:

gscope_collection.tcl, line 6265

AffichePeptideSort

proc AffichePeptideSort { Nom {Page {}} {ShowEnzymes {}} }

Defined in:

gscope_collection.tcl, line 1995

AffymetrixAccess

proc AffymetrixAccess { Nom }

Defined in:

gscope_collection.tcl, line 1014

AffymetrixAssocie

proc AffymetrixAssocie {  }

Defined in:

gscope_collection.tcl, line 3525

Alias

proc Alias { Nom }

Defined in:

gscope_collection.tcl, line 6232

AliasDansTfaPourTous

proc AliasDansTfaPourTous {  }

Defined in:

gscope_collection.tcl, line 557

AliasParNomDuFichier

proc AliasParNomDuFichier {  }

Defined in:

gscope_collection.tcl, line 1145

AliasPourTous

proc AliasPourTous {  }

Defined in:

gscope_collection.tcl, line 6168

AnchorsCount

proc AnchorsCount { Nom }

Defined in:

gscope_collection.tcl, line 2163

AppendFOF

proc AppendFOF { {Rep {}} {NewRep {}} {FichierFOF {}} }

Defined in:

gscope_collection.tcl, line 357

ATGAenOverlap

proc ATGAenOverlap {  }

Defined in:

gscope_collection.tcl, line 1558

BannisLePAB

proc BannisLePAB { Nom {Garde {}} }

Defined in:

gscope_collection.tcl, line 1479

BetterStartCodon

proc BetterStartCodon {  }

Defined in:

gscope_collection.tcl, line 1524

Blast

proc Blast { {Programme {}} {Sequence {}} {NomOuNumOuSortie {}} {Banque {}} {WithGenericCommand {}} }

Defined in:

gscope_collection.tcl, line 82

BlastDesHitsHumainsDuProfil

proc BlastDesHitsHumainsDuProfil {  }

Defined in:

gscope_collection.tcl, line 1056

Blaste

proc Blaste { Programme Sequence {NomOuNumOuSortie {}} {Banque {}} }

Defined in:

gscope_collection.tcl, line 185

BlastPDeLaPreditePourTous

proc BlastPDeLaPreditePourTous { {NomATraiter {}} }

Defined in:

gscope_collection.tcl, line 5127

BlastPPourCollection

proc BlastPPourCollection { Nom }

Defined in:

gscope_collection.tcl, line 5930

BlastXdeADN

proc BlastXdeADN { Nom DebutBlastX FinBlastX }

Defined in:

gscope_collection.tcl, line 261

BornesDuGeneEtendu

proc BornesDuGeneEtendu { Nom }

Defined in:

gscope_collection.tcl, line 2284

CAI

proc CAI { Nom }

Defined in:

gscope_collection.tcl, line 943

CasimirCutted

proc CasimirCutted { Nom }

Defined in:

gscope_collection.tcl, line 1654

CetOrdre

proc CetOrdre { Af Cd }

Defined in:

gscope_collection.tcl, line 4107

ChampsInteressantsDansTexteEMBL

proc ChampsInteressantsDansTexteEMBL { Texte }

Defined in:

gscope_collection.tcl, line 1416

ChargeNarcisseDuAlias

proc ChargeNarcisseDuAlias { {Fichier {}} }

Defined in:

gscope_collection.tcl, line 7381

CheckCompletion

proc CheckCompletion { Qui {Quoi {}} }

Defined in:

gscope_collection.tcl, line 511

ChoisisTonBlast

proc ChoisisTonBlast { FichierTFA FichierBlast {Programme {}} {Banque {}} {Ask {}} }

Defined in:

gscope_collection.tcl, line 6789

CleanSpace

proc CleanSpace {  }

Defined in:

gscope_collection.tcl, line 3591

CodeClone

proc CodeClone { Nom }

Defined in:

gscope_collection.tcl, line 1022

CodeCloneDuAffymetrix

proc CodeCloneDuAffymetrix { Affy }

Defined in:

gscope_collection.tcl, line 3916

CodonsRares

proc CodonsRares { Seq {SansZero {}} {args {}} }

Defined in:

gscope_collection.tcl, line 2122

CodonW

proc CodonW {  }

Defined in:

gscope_collection.tcl, line 924

CompareChroContLoc

proc CompareChroContLoc { LigneA LigneB }

Defined in:

gscope_collection.tcl, line 1087

ComplementInfoPourTous

proc ComplementInfoPourTous {  }

Defined in:

gscope_collection.tcl, line 6142

CompteLesStartCodonsOk

proc CompteLesStartCodonsOk {  }

Defined in:

gscope_collection.tcl, line 2383

ConsacreVersusPredite

proc ConsacreVersusPredite { Nom }

Defined in:

gscope_collection.tcl, line 4424

Cousins

proc Cousins { args }

Defined in:

gscope_collection.tcl, line 3805

CreeAccessAliasDefinitionPourPeroxNew

proc CreeAccessAliasDefinitionPourPeroxNew {  }

Defined in:

gscope_collection.tcl, line 5839

CreeBanqueBlastDuFichier

proc CreeBanqueBlastDuFichier { Fichier {NomDeLaBanque {}} {NomDeBapteme {}} {Format {}} }

Defined in:

gscope_collection.tcl, line 1891

CreeBornesDesCDNAs

proc CreeBornesDesCDNAs { {Qui {}} {Adjonction {}} }

Defined in:

gscope_collection.tcl, line 5351

CreeBornesDesPABsAvecTFAs

proc CreeBornesDesPABsAvecTFAs { {FichierTFAs {}} {KeepEntete {}} {CreateNarcisse {}} {ForceAccessFirst {}} }

Defined in:

gscope_collection.tcl, line 3012

CreeBornesDesPABsLoc

proc CreeBornesDesPABsLoc {  }

Defined in:

gscope_collection.tcl, line 3601

CreeBornesDesPABsPourUneCollection

proc CreeBornesDesPABsPourUneCollection { FOF {RefaireCeNomUniquement {}} }

Defined in:

gscope_collection.tcl, line 7412

CreeFOF

proc CreeFOF { {Rep {}} }

Defined in:

gscope_collection.tcl, line 345

CreeLesBanquesBlastDesTFAsPourTous

proc CreeLesBanquesBlastDesTFAsPourTous { {RepTFAs {}} {RepBanques {}} {FormatProt {}} }

Defined in:

gscope_collection.tcl, line 6977

CreeLesCDNAsDeRegine

proc CreeLesCDNAsDeRegine { {Fichier {}} {Repertoire {}} }

Defined in:

gscope_collection.tcl, line 2878

CreeLesCoBlastn

proc CreeLesCoBlastn { Nom }

Defined in:

gscope_collection.tcl, line 7057

CreeLesCoClustalw

proc CreeLesCoClustalw { Nom }

Defined in:

gscope_collection.tcl, line 7122

CreeLesCopains

proc CreeLesCopains { Nom }

Defined in:

gscope_collection.tcl, line 7023

CreeLesFichiersTFAsDesMeilleursCopainsDuBlastPourTous

proc CreeLesFichiersTFAsDesMeilleursCopainsDuBlastPourTous { RepBlast GrosFichierTFAs {Expect 1e-25} {RepTFAs {}} }

Defined in:

gscope_collection.tcl, line 2923

CreeProteomeAvecUneListeAccessAliasDefinition

proc CreeProteomeAvecUneListeAccessAliasDefinition { Fichier {AADorBAAD {}} }

Defined in:

gscope_collection.tcl, line 5940

CreeTfaPourCodonw

proc CreeTfaPourCodonw {  }

Defined in:

gscope_collection.tcl, line 965

CreeTousLesRapportsPourAccess

proc CreeTousLesRapportsPourAccess { {Start {}} {Keep {}} }

Defined in:

gscope_collection.tcl, line 4543

CreeToutesLesNotesPourCDNA

proc CreeToutesLesNotesPourCDNA { {Start {}} {Keep {}} }

Defined in:

gscope_collection.tcl, line 4725

CreeUneBanqueBlast

proc CreeUneBanqueBlast { {Selection {}} {RepBanquesBanque {}} }

Defined in:

gscope_collection.tcl, line 6872

CreeUneBanqueBlastDuBlast

proc CreeUneBanqueBlastDuBlast { Fichier {NomDeLaBanque {}} {AvecQuery {}} }

Defined in:

gscope_collection.tcl, line 7015

CreeUneBanqueBlastDuPAB

proc CreeUneBanqueBlastDuPAB { Nom {AvecQuery {}} {Rep {}} }

Defined in:

gscope_collection.tcl, line 7007

CreeUneBanqueBlastDuTFAs

proc CreeUneBanqueBlastDuTFAs { FicTFAs {RepBanques {}} {FormatProt {}} }

Defined in:

gscope_collection.tcl, line 6992

CreeUnTFAs

proc CreeUnTFAs { Selection {FichierACreer {}} }

Defined in:

gscope_collection.tcl, line 2463

CreeUnTFAsDesListesBidAccess

proc CreeUnTFAsDesListesBidAccess { lBanqueId lAccess {FichierACreer {}} }

Defined in:

gscope_collection.tcl, line 2519

DecortiCohen

proc DecortiCohen {  }

Defined in:

gscope_collection.tcl, line 2411

DecortiqueBlastPCDNA

proc DecortiqueBlastPCDNA { BanqueID Hit Quoi {Fichier {}} {MaxAccess -1} {MaxHitsParAccess -1} }

Defined in:

gscope_collection.tcl, line 4880

DecortiquePeptideSort

proc DecortiquePeptideSort { Texte {Element {}} {aT {}} }

Defined in:

gscope_collection.tcl, line 1954

DecortiqueSortieRepeatMasker

proc DecortiqueSortieRepeatMasker { RepeatVoulu Quoi {Texte {}} }

Defined in:

gscope_collection.tcl, line 5067

DeleteBallast

proc DeleteBallast {  }

Defined in:

gscope_collection.tcl, line 6521

DesNouvellesSequencesPourGscope

proc DesNouvellesSequencesPourGscope { Fichier }

Defined in:

gscope_collection.tcl, line 728

EstCeVraimentUneNouvelleSequence

proc EstCeVraimentUneNouvelleSequence { TFA {NucOuPro {}} }

Defined in:

gscope_collection.tcl, line 756

EstUneFusion

proc EstUneFusion { Nom }

Defined in:

gscope_collection.tcl, line 652

ExtraitLesSequencesDuTFAs

proc ExtraitLesSequencesDuTFAs { FichierTFAs LesAccess }

Defined in:

gscope_collection.tcl, line 2958

FamiliarOrganism

proc FamiliarOrganism { Genre {Espece {}} }

Defined in:

gscope_collection.tcl, line 2724

FamiliarTaxId

proc FamiliarTaxId { TaxId {Quoi {}} }

Defined in:

gscope_collection.tcl, line 2703

Family

proc Family { Nom }

Defined in:

gscope_collection.tcl, line 6138

FormatDesNumerosPourCollection

proc FormatDesNumerosPourCollection { {OrfNumbering {}} }

Defined in:

gscope_collection.tcl, line 6236

FourBasesOverlap

proc FourBasesOverlap {  }

Defined in:

gscope_collection.tcl, line 1623

FragFrom

proc FragFrom { Nom {Start {}} {StopVoulu {}} }

Defined in:

gscope_collection.tcl, line 391

Fusion

proc Fusion { Nom }

Defined in:

gscope_collection.tcl, line 648

GeneEtendu

proc GeneEtendu { Nom {Quoi {}} }

Defined in:

gscope_collection.tcl, line 2221

GlimmersPerdus

proc GlimmersPerdus { {Quoi LesPerdus} }

Defined in:

gscope_collection.tcl, line 1635

HistogrammeDuCAI

proc HistogrammeDuCAI {  }

Defined in:

gscope_collection.tcl, line 914

ImprimeLesOrgaEtSesPlaces

proc ImprimeLesOrgaEtSesPlaces {  }

Defined in:

gscope_collection.tcl, line 6433

InformeIdentitesDuCDNA

proc InformeIdentitesDuCDNA { Nom }

Defined in:

gscope_collection.tcl, line 1032

InformeIdentitesDuCDNAPourTous

proc InformeIdentitesDuCDNAPourTous {  }

Defined in:

gscope_collection.tcl, line 1026

InformeLaFusionAvecProttfa

proc InformeLaFusionAvecProttfa { Nom }

Defined in:

gscope_collection.tcl, line 666

InformeLaFusionAvecProttfaPourTous

proc InformeLaFusionAvecProttfaPourTous {  }

Defined in:

gscope_collection.tcl, line 658

InformeLeCopain

proc InformeLeCopain { NomAccess {Append {}} }

Defined in:

gscope_collection.tcl, line 6311

InformeLeCopainSansDemander

proc InformeLeCopainSansDemander { NomAccess {Append {}} }

Defined in:

gscope_collection.tcl, line 6302

InformeLesCopainsDeThetase

proc InformeLesCopainsDeThetase { {Liste {}} }

Defined in:

gscope_collection.tcl, line 6274

InformeParChangementEnteteDuChamp

proc InformeParChangementEnteteDuChamp { Ancien Nouveau }

Defined in:

gscope_collection.tcl, line 5896

InformeValiGNParAlias

proc InformeValiGNParAlias {  }

Defined in:

gscope_collection.tcl, line 5886

Inventaire

proc Inventaire { {GetWhat {}} }

Defined in:

gscope_collection.tcl, line 6679

IsNuc

proc IsNuc { Sequence {ForceNucProt {}} }

Defined in:

gscope_collection.tcl, line 14

IsProt

proc IsProt { Sequence {ForceNucProt {}} }

Defined in:

gscope_collection.tcl, line 3

JumeauRepresentatif

proc JumeauRepresentatif { Nom }

Defined in:

gscope_collection.tcl, line 3557

Jumeaux

proc Jumeaux { {Source {}} {Rep {}} }

Defined in:

gscope_collection.tcl, line 3850

LaListeNomAlias

proc LaListeNomAlias {  }

Defined in:

gscope_collection.tcl, line 6195

LaTotalePourLesCDNAs

proc LaTotalePourLesCDNAs {  }

Defined in:

gscope_collection.tcl, line 1510

LesAffymetrixDuOwner

proc LesAffymetrixDuOwner { Owner }

Defined in:

gscope_collection.tcl, line 2914

LesAffymetrixEnOverlap

proc LesAffymetrixEnOverlap { Nom }

Defined in:

gscope_collection.tcl, line 4126

LesAiresCliquablesDuHTML

proc LesAiresCliquablesDuHTML { {FichierHTML {}} }

Defined in:

gscope_collection.tcl, line 5804

LesAliasExistants

proc LesAliasExistants {  }

Defined in:

gscope_collection.tcl, line 6205

LesBornesDeChroContig

proc LesBornesDeChroContig { Chro Contig }

Defined in:

gscope_collection.tcl, line 4068

LesBornesDesGenesEtendus

proc LesBornesDesGenesEtendus { {Fichier {}} }

Defined in:

gscope_collection.tcl, line 2259

LesCDNAsEnOverlap

proc LesCDNAsEnOverlap { Nom {BestOnly {}} }

Defined in:

gscope_collection.tcl, line 3727

LesClassesDuGlossaire

proc LesClassesDuGlossaire {  }

Defined in:

gscope_collection.tcl, line 6496

LesCodeCloneDesAffymetrixEnOverlap

proc LesCodeCloneDesAffymetrixEnOverlap { Nom }

Defined in:

gscope_collection.tcl, line 4115

LesGenomesCompletsBizarres

proc LesGenomesCompletsBizarres { {Quoi {}} }

Defined in:

gscope_collection.tcl, line 2611

LesLocalisationsSurChroContig

proc LesLocalisationsSurChroContig { NomVoulu }

Defined in:

gscope_collection.tcl, line 5229

LesMauvaisInfos

proc LesMauvaisInfos {  }

Defined in:

gscope_collection.tcl, line 596

LesMeilleursCopainsDuBlast

proc LesMeilleursCopainsDuBlast { Nom {Rep blastngenembl} }

Defined in:

gscope_collection.tcl, line 4260

LesOubliesParGscope

proc LesOubliesParGscope {  }

Defined in:

gscope_collection.tcl, line 688

LesPABsDansLOrdre

proc LesPABsDansLOrdre { {Replace {}} }

Defined in:

gscope_collection.tcl, line 6392

LesPABsDuTFAs

proc LesPABsDuTFAs { Fichier {Rep {}} }

Defined in:

gscope_collection.tcl, line 473

LesPlusProchesPABs

proc LesPlusProchesPABs { Sequence {BestOnlyOrExpectOrMaxList {}} {ForceNucProt {}} {BanqueBlast {}} {Programme {}} }

Defined in:

gscope_collection.tcl, line 19

LireHori

proc LireHori { Fichier {FichierSuivant {}} }

Defined in:

gscope_collection.tcl, line 6643

ListeDesFusions

proc ListeDesFusions {  }

Defined in:

gscope_collection.tcl, line 621

Maigrir

proc Maigrir { {Quoi blastp} {Combien {}} {NomVoulu {}} {NewRep {}} }

Defined in:

gscope_collection.tcl, line 3447

MapCliquable

proc MapCliquable { {Action Create} {Repertoire {}} }

Defined in:

gscope_collection.tcl, line 5716

Maquille

proc Maquille { Nom }

Defined in:

gscope_collection.tcl, line 6127

MaquilleLeMSF

proc MaquilleLeMSF { FichierMSF LesAnciens LesNouveaux {MaxAccess {}} {Force {}} {NouveauFichier {}} }

Defined in:

gscope_collection.tcl, line 7216

MaquillePourTous

proc MaquillePourTous { {LaListeMerci {}} }

Defined in:

gscope_collection.tcl, line 6083

MeilleureLocalisationSurChroContig

proc MeilleureLocalisationSurChroContig { Nom }

Defined in:

gscope_collection.tcl, line 3719

MeilleurPdbDuBlast

proc MeilleurPdbDuBlast { Nom {Rep {}} {CutPN {}} {MaxListe {}} }

Defined in:

gscope_collection.tcl, line 4378

MeilleurPdbDuMsf

proc MeilleurPdbDuMsf { Nom {Rep {}} {Query {}} }

Defined in:

gscope_collection.tcl, line 4400

MeilleursCopains

proc MeilleursCopains { Nom {Organisme {Homo sapiens}} }

Defined in:

gscope_collection.tcl, line 4971

MeilleursCopainsDuBlast

proc MeilleursCopainsDuBlast { Nom {Rep blastngenembl} {CutPN {}} {MaxListe {}} }

Defined in:

gscope_collection.tcl, line 4323

MeilleursCopainsDuBlastPourTous

proc MeilleursCopainsDuBlastPourTous { {Rep blastngenembl} {CutPN {}} {MaxListe {}} }

Defined in:

gscope_collection.tcl, line 4287

MergeLesPolylocalise

proc MergeLesPolylocalise {  }

Defined in:

gscope_collection.tcl, line 2314

MoveLesReMask

proc MoveLesReMask {  }

Defined in:

gscope_collection.tcl, line 1137

MSFPourCollection

proc MSFPourCollection { Nom }

Defined in:

gscope_collection.tcl, line 5935

NarcisseDansLOrdreDesPABs

proc NarcisseDansLOrdreDesPABs {  }

Defined in:

gscope_collection.tcl, line 6369

NarcisseDuAliasPourTous

proc NarcisseDuAliasPourTous {  }

Defined in:

gscope_collection.tcl, line 5862

NearestOrganismsHit

proc NearestOrganismsHit { Nom }

Defined in:

gscope_collection.tcl, line 581

NettoieTriBlast

proc NettoieTriBlast {  }

Defined in:

gscope_collection.tcl, line 501

NewGenes

proc NewGenes { FichierListe {RepDestin {}} {FOF {}} }

Defined in:

gscope_collection.tcl, line 425

NomDuAlias

proc NomDuAlias { Alias }

Defined in:

gscope_collection.tcl, line 6209

Nommenclature

proc Nommenclature { Nom {OrganismeComplet {}} }

Defined in:

gscope_collection.tcl, line 6754

OldCreeBornesDesPABsLoc

proc OldCreeBornesDesPABsLoc {  }

Defined in:

gscope_collection.tcl, line 3659

Ordali

proc Ordali { {NomOuFichier {}} {FichierOrigine {}} {EnExec {}} {OptionsOrdali {}} {ForceXml {}} }

Defined in:

gscope_collection.tcl, line 6535

OrdaliDuTexteMSF

proc OrdaliDuTexteMSF { MSF {FichierOrigine {}} {OptionsOrdali {}} }

Defined in:

gscope_collection.tcl, line 6530

OrganismeDuPAB

proc OrganismeDuPAB { Nom {Format {}} }

Defined in:

gscope_collection.tcl, line 1260

OrganismeFormate

proc OrganismeFormate { Organisme {Format {}} }

Defined in:

gscope_collection.tcl, line 1163

OrthographeCanonique

proc OrthographeCanonique { Texte }

Defined in:

gscope_collection.tcl, line 2560

OwnerOfCDNA

proc OwnerOfCDNA { Nom }

Defined in:

gscope_collection.tcl, line 1018

PartieNomsDesSequencesDuBlast

proc PartieNomsDesSequencesDuBlast { Fichier {AvecQuery {}} }

Defined in:

gscope_collection.tcl, line 6858

PeptideSort

proc PeptideSort { NomOuFichierOuTexte {ShowEnzymes {}} }

Defined in:

gscope_collection.tcl, line 2010

PetitGscope

proc PetitGscope { Ancien Nouveau {FichierOuListeDesAnciens {}} {Debut {}} {Fin {}} }

Defined in:

gscope_collection.tcl, line 1770

QuelleFonte

proc QuelleFonte { F }

Defined in:

gscope_collection.tcl, line 6639

QuelsCopainsDisponibles

proc QuelsCopainsDisponibles {  }

Defined in:

gscope_collection.tcl, line 6072

QuiManque

proc QuiManque {  }

Defined in:

gscope_collection.tcl, line 1304

QuiTouche

proc QuiTouche { Chro {Contig {}} }

Defined in:

gscope_collection.tcl, line 2548

QuiToucheCeChromosome

proc QuiToucheCeChromosome { Chromo }

Defined in:

gscope_collection.tcl, line 2543

ReAligne

proc ReAligne { Nom {FichierMSF {}} }

Defined in:

gscope_collection.tcl, line 3402

ReAlignePourTous

proc ReAlignePourTous {  }

Defined in:

gscope_collection.tcl, line 3368

RechercheLesAccess

proc RechercheLesAccess { Fichier }

Defined in:

gscope_collection.tcl, line 2352

RemoveMito

proc RemoveMito {  }

Defined in:

gscope_collection.tcl, line 2337

RepartitionDesOverlaps

proc RepartitionDesOverlaps {  }

Defined in:

gscope_collection.tcl, line 1605

RepDesNucPourCodonW

proc RepDesNucPourCodonW {  }

Defined in:

gscope_collection.tcl, line 1002

RepriseDesVieuxInfos

proc RepriseDesVieuxInfos { Source PrefixeSource }

Defined in:

gscope_collection.tcl, line 6447

RepriseDuGscope

proc RepriseDuGscope { Ancien Nouveau }

Defined in:

gscope_collection.tcl, line 2075

RestrictionMap

proc RestrictionMap { TexteOuFichierTFA }

Defined in:

gscope_collection.tcl, line 1929

RetireNarcisseDesMSFs

proc RetireNarcisseDesMSFs {  }

Defined in:

gscope_collection.tcl, line 2201

RetourneBisAccess

proc RetourneBisAccess { Fichier }

Defined in:

gscope_collection.tcl, line 1501

SameOrganism

proc SameOrganism { Organisme Famille {SansGlossaire {}} }

Defined in:

gscope_collection.tcl, line 1114

SampledOrganism

proc SampledOrganism { Genre {Espece {}} }

Defined in:

gscope_collection.tcl, line 2640

SansAmbiguite

proc SansAmbiguite { LesNouveaux }

Defined in:

gscope_collection.tcl, line 7198

SeqElong

proc SeqElong {  }

Defined in:

gscope_collection.tcl, line 1102

ShowHTMLBox

proc ShowHTMLBox { K Action }

Defined in:

gscope_collection.tcl, line 5688

StockeLesSequencesEtMaquilleLeMSF

proc StockeLesSequencesEtMaquilleLeMSF { FichierMSF Alias Nom }

Defined in:

gscope_collection.tcl, line 7281

StopCommeGlimmer

proc StopCommeGlimmer { {Qui compte} }

Defined in:

gscope_collection.tcl, line 1670

Taxonomy

proc Taxonomy { Nom }

Defined in:

gscope_collection.tcl, line 1159

TBlastNDuConsacreDeLaPreditePourTous

proc TBlastNDuConsacreDeLaPreditePourTous { {Banque est} }

Defined in:

gscope_collection.tcl, line 4446

TDP

proc TDP { {Element {}} }

Defined in:

gscope_collection.tcl, line 1947

TestEstCeVraimentUneNouvelleSequence

proc TestEstCeVraimentUneNouvelleSequence { {NP {}} }

Defined in:

gscope_collection.tcl, line 749

TestRetourne

proc TestRetourne {  }

Defined in:

gscope_collection.tcl, line 6672

TexteTFAsDesMeilleursCopainsDuBlast

proc TexteTFAsDesMeilleursCopainsDuBlast { Nom RepBlast GrosFichierTFAs {Expect 0.001} }

Defined in:

gscope_collection.tcl, line 2940

TFAsDeLaListe

proc TFAsDeLaListe { Liste {Rep {}} {FichierACreer {}} }

Defined in:

gscope_collection.tcl, line 2445

TooCloseOrganism

proc TooCloseOrganism { Genre {Espece {}} }

Defined in:

gscope_collection.tcl, line 2806

TriLesLocalisations

proc TriLesLocalisations { {BestOnly {}} }

Defined in:

gscope_collection.tcl, line 4203

UneNouvelleSequencePourGscope

proc UneNouvelleSequencePourGscope { {Nouveau {}} {Maniere {}} }

Defined in:

gscope_collection.tcl, line 791

VerifieAgam

proc VerifieAgam {  }

Defined in:

gscope_collection.tcl, line 314

VerifieLesNarcissesDesMutants

proc VerifieLesNarcissesDesMutants {  }

Defined in:

gscope_collection.tcl, line 6359

VerifieLesPDBs

proc VerifieLesPDBs {  }

Defined in:

gscope_collection.tcl, line 5906

VoirADNduContig

proc VoirADNduContig { ChroContig Selection }

Defined in:

gscope_collection.tcl, line 3240

VoirLaMeilleureLocalisationDuCDNA

proc VoirLaMeilleureLocalisationDuCDNA { Nom }

Defined in:

gscope_collection.tcl, line 3924

VoirLesLocalisations

proc VoirLesLocalisations { Chro Contig }

Defined in:

gscope_collection.tcl, line 3953

VoirLesLocalisationsDuCDNA

proc VoirLesLocalisationsDuCDNA { Nom {Selection {}} }

Defined in:

gscope_collection.tcl, line 3936

WithOverlapAffymetrix

proc WithOverlapAffymetrix { Nom }

Defined in:

gscope_collection.tcl, line 2910

XtoN

proc XtoN { FichierTFA }

Defined in:

gscope_collection.tcl, line 2998