gscope_dessins.tcl Annotations

Procedure Detail

AfficheLeBlastNDuContig

proc AfficheLeBlastNDuContig { K x y }

Defined in:

gscope_dessins.tcl, line 3621

AfficheLeSpectreGC

proc AfficheLeSpectreGC { K MinSpectreY MaxSpectreY }

Defined in:

gscope_dessins.tcl, line 1735

AfficheLeSpectreGCenCouleur

proc AfficheLeSpectreGCenCouleur { K PosLineY }

Defined in:

gscope_dessins.tcl, line 1789

AfficheMsfFamily

proc AfficheMsfFamily { Nom }

Defined in:

gscope_dessins.tcl, line 356

AfficheORGAorgaDesMSFs

proc AfficheORGAorgaDesMSFs { {Etat {}} }

Defined in:

gscope_dessins.tcl, line 2689

AfficheTexte

proc AfficheTexte { Texte {Titre {}} {X {}} {Y {}} }

Defined in:

gscope_dessins.tcl, line 4614

AnalyseLeBlastN

proc AnalyseLeBlastN { Fichier {BanqueBlast {}} }

Defined in:

gscope_dessins.tcl, line 3974

BlastNDesContigsPures

proc BlastNDesContigsPures {  }

Defined in:

gscope_dessins.tcl, line 3833

BlastNDUnOrgaComplet

proc BlastNDUnOrgaComplet { {FichierTFA {}} }

Defined in:

gscope_dessins.tcl, line 4164

CanvaDuRectangleDegrade

proc CanvaDuRectangleDegrade {  }

Defined in:

gscope_dessins.tcl, line 617

ChoixDesGenomesCompletsPresentsAbsents

proc ChoixDesGenomesCompletsPresentsAbsents { {Ask {}} {LesGenomesAChoisir {}} }

Defined in:

gscope_dessins.tcl, line 2166

ClassFromIdSvg

proc ClassFromIdSvg { {Source {}} {Destin {}} {LesIdAClasser {}} {LesIdAGarder {}} }

Defined in:

gscope_dessins.tcl, line 3

CoGlimmer

proc CoGlimmer { Nom }

Defined in:

gscope_dessins.tcl, line 4753

CompositionEn

proc CompositionEn { Type Nom }

Defined in:

gscope_dessins.tcl, line 1627

ComptonsLesSolitaires

proc ComptonsLesSolitaires {  }

Defined in:

gscope_dessins.tcl, line 367

ComptonsLesStartCodon

proc ComptonsLesStartCodon {  }

Defined in:

gscope_dessins.tcl, line 374

ConcateneLesContigs

proc ConcateneLesContigs { {FichierACreer {}} {NomDeBapteme {}} }

Defined in:

gscope_dessins.tcl, line 4555

ContigDuPAB

proc ContigDuPAB { Nom }

Defined in:

gscope_dessins.tcl, line 4518

CorrigeAnabaenaNostoc

proc CorrigeAnabaenaNostoc {  }

Defined in:

gscope_dessins.tcl, line 468

CorrigeOo

proc CorrigeOo { {Oo {}} }

Defined in:

gscope_dessins.tcl, line 3238

CouleurAuNombreDeCopainsDansBlast

proc CouleurAuNombreDeCopainsDansBlast { nCops {K {}} }

Defined in:

gscope_dessins.tcl, line 1921

CouleurParTypeEtNom

proc CouleurParTypeEtNom { TypeDeCouleur Nom K }

Defined in:

gscope_dessins.tcl, line 706

CreeClasseDesOrganismes

proc CreeClasseDesOrganismes {  }

Defined in:

gscope_dessins.tcl, line 4506

CreeCorrespondanceAvecGlimmer

proc CreeCorrespondanceAvecGlimmer { {FichierCoGlimmer {}} }

Defined in:

gscope_dessins.tcl, line 4787

CreeGIF

proc CreeGIF {  }

Defined in:

gscope_dessins.tcl, line 4905

CreeLaBanqueBlastN

proc CreeLaBanqueBlastN { {FichierTFAs {}} }

Defined in:

gscope_dessins.tcl, line 4232

CreeLaBanqueBlastPureSansTroncon

proc CreeLaBanqueBlastPureSansTroncon {  }

Defined in:

gscope_dessins.tcl, line 3824

CreeLeFichierCompositionEnATGC

proc CreeLeFichierCompositionEnATGC {  }

Defined in:

gscope_dessins.tcl, line 1660

CreeLesBornesDuBlastN

proc CreeLesBornesDuBlastN { Fichier {BanqueBlast {}} }

Defined in:

gscope_dessins.tcl, line 4100

CreeLesFichiersSpectreDesGC

proc CreeLesFichiersSpectreDesGC { {SequenceADN {}} {Retour {}} {lWin 400} }

Defined in:

gscope_dessins.tcl, line 1799

CreeOrthoBlastP

proc CreeOrthoBlastP { {NomVoulu {}} }

Defined in:

gscope_dessins.tcl, line 2848

CreeOrthoTBlastN

proc CreeOrthoTBlastN {  }

Defined in:

gscope_dessins.tcl, line 3038

DecalageAngulaireRosace

proc DecalageAngulaireRosace {  }

Defined in:

gscope_dessins.tcl, line 5293

DefinirLaCouleurAuLancement

proc DefinirLaCouleurAuLancement { K }

Defined in:

gscope_dessins.tcl, line 183

DetecteLesMauvaisOrganismes

proc DetecteLesMauvaisOrganismes { Fichier }

Defined in:

gscope_dessins.tcl, line 267

Devoile

proc Devoile { K X Y {EffaceOuNOuAction end-1} }

Defined in:

gscope_dessins.tcl, line 561

DismissToutesLesFenetres

proc DismissToutesLesFenetres {  }

Defined in:

gscope_dessins.tcl, line 541

DotPlotADN

proc DotPlotADN { PosX PosY }

Defined in:

gscope_dessins.tcl, line 4859

DotPlotBlastN

proc DotPlotBlastN { {Fichier {}} {BanqueBlast {}} }

Defined in:

gscope_dessins.tcl, line 4280

DotPlotDesInteressants

proc DotPlotDesInteressants { Orga }

Defined in:

gscope_dessins.tcl, line 3941

EnMajuscule

proc EnMajuscule { Fichier {Action toupper} }

Defined in:

gscope_dessins.tcl, line 4668

EntreDansCoeur

proc EntreDansCoeur { K X Y {Propagate {}} }

Defined in:

gscope_dessins.tcl, line 2458

GetSignification

proc GetSignification { Couleur K }

Defined in:

gscope_dessins.tcl, line 2149

Graphe

proc Graphe { LesX {LesY {}} {K {}} {Couleur {}} {Largeur {}} {Hauteur {}} {CigCsd {}} {AvecAxes {}} {Titre {}} {LaListeDesTags {}} {DotOnly {}} {BindOnly {}} {LargeurMax {}} {HauteurMax {}} }

Defined in:

gscope_dessins.tcl, line 2311

GrapheDuFichier

proc GrapheDuFichier { {Fichier {}} Format }

Defined in:

gscope_dessins.tcl, line 2236

GrapheExpressedTissuesOLD

proc GrapheExpressedTissuesOLD {  }

Defined in:

gscope_dessins.tcl, line 2305

GraphesEnStock

proc GraphesEnStock { {Quoi {}} {K {}} {R {}} }

Defined in:

gscope_dessins.tcl, line 2267

GrapheVecItem

proc GrapheVecItem { Fichier }

Defined in:

gscope_dessins.tcl, line 651

GscopeBoard

proc GscopeBoard { {Titre {}} {PourGif {}} }

Defined in:

gscope_dessins.tcl, line 4915

HIDDEN_MiseAJourHtml

proc HIDDEN_MiseAJourHtml { {W {}} {Action Append} }

Defined in:

gscope_dessins.tcl, line 1991

HistogrammeDesGC

proc HistogrammeDesGC {  }

Defined in:

gscope_dessins.tcl, line 2558

HsapiensGeneDefLoc

proc HsapiensGeneDefLoc { Query {Quoi {}} }

Defined in:

gscope_dessins.tcl, line 288

LaListeToBeOrthologue

proc LaListeToBeOrthologue { {PlusMinusOrgas {}} }

Defined in:

gscope_dessins.tcl, line 2591

LesGenomesDansLeBonOrdre

proc LesGenomesDansLeBonOrdre { {Ordre BAE} {QueVeutOn {}} }

Defined in:

gscope_dessins.tcl, line 2766

LesHomologiesDuBlastN

proc LesHomologiesDuBlastN { Fichier {AvecLaSeq {}} {BanqueBlast {}} {Maniere {}} {Qui {}} }

Defined in:

gscope_dessins.tcl, line 4341

LesOrganismesOrthologues

proc LesOrganismesOrthologues { Nom {Prog DbClustal} {PA Presents} {Format Complet} }

Defined in:

gscope_dessins.tcl, line 502

LesZonesDuBlastNEnOverlap

proc LesZonesDuBlastNEnOverlap { Fichier }

Defined in:

gscope_dessins.tcl, line 3993

MaxiDeLaListe

proc MaxiDeLaListe { LesX }

Defined in:

gscope_dessins.tcl, line 2228

Milieu

proc Milieu { Nom }

Defined in:

gscope_dessins.tcl, line 2526

MiniDeLaListe

proc MiniDeLaListe { LesX }

Defined in:

gscope_dessins.tcl, line 2220

NomDeLaFrame

proc NomDeLaFrame { A Orient }

Defined in:

gscope_dessins.tcl, line 1607

NomDeScene

proc NomDeScene { Nom }

Defined in:

gscope_dessins.tcl, line 1518

NouveauPack

proc NouveauPack {  }

Defined in:

gscope_dessins.tcl, line 611

ORGAorgaDesBlastPs

proc ORGAorgaDesBlastPs { {Nom {}} {Etat {}} }

Defined in:

gscope_dessins.tcl, line 3270

ORGAorgaDesMSFs

proc ORGAorgaDesMSFs { {Nom {}} {Etat {}} }

Defined in:

gscope_dessins.tcl, line 3376

ORGAorgaDesOperons

proc ORGAorgaDesOperons { {Nom {}} {Etat {}} }

Defined in:

gscope_dessins.tcl, line 3499

ORGAorgaDesTBlastNs

proc ORGAorgaDesTBlastNs { {Nom {}} {Etat {}} }

Defined in:

gscope_dessins.tcl, line 3133

OrgasAbsentsDesGenomesComplets

proc OrgasAbsentsDesGenomesComplets { Nom }

Defined in:

gscope_dessins.tcl, line 2685

OrgasHesitantsDesGenomesComplets

proc OrgasHesitantsDesGenomesComplets { Nom }

Defined in:

gscope_dessins.tcl, line 2681

OrgasPresentsDesGenomesComplets

proc OrgasPresentsDesGenomesComplets { Nom }

Defined in:

gscope_dessins.tcl, line 2677

OrthoBlastP

proc OrthoBlastP { Nom {Orga {}} {OrgaOK {}} }

Defined in:

gscope_dessins.tcl, line 2970

OrthoTBlastN

proc OrthoTBlastN { Nom Orga }

Defined in:

gscope_dessins.tcl, line 3076

OverlapDeUn

proc OverlapDeUn {  }

Defined in:

gscope_dessins.tcl, line 445

pack

proc pack { args }

Defined in:

gscope_dessins.tcl, line 612

PhylumDuGenome

proc PhylumDuGenome { Genome {Quoi Phylum} }

Defined in:

gscope_dessins.tcl, line 2720

PhylumDuOC

proc PhylumDuOC { OC }

Defined in:

gscope_dessins.tcl, line 2712

PhylumDuOrganisme

proc PhylumDuOrganisme { Organisme {Espece {}} }

Defined in:

gscope_dessins.tcl, line 2696

PiqueArc

proc PiqueArc { K X Y {Efface {}} }

Defined in:

gscope_dessins.tcl, line 1492

PointeDotPlot

proc PointeDotPlot { K X Y }

Defined in:

gscope_dessins.tcl, line 3800

PresenceEtAbsenceDesGenomesComplets

proc PresenceEtAbsenceDesGenomesComplets { Nom {Source {}} }

Defined in:

gscope_dessins.tcl, line 2203

RACtoTFA

proc RACtoTFA { Fichier }

Defined in:

gscope_dessins.tcl, line 552

RecapitulatifDesOrthologues

proc RecapitulatifDesOrthologues { Nom {TPA OTPMA} }

Defined in:

gscope_dessins.tcl, line 2634

ReColore

proc ReColore { Marque Color }

Defined in:

gscope_dessins.tcl, line 1897

RecoloreLesBoites

proc RecoloreLesBoites { TypeDeCouleur K }

Defined in:

gscope_dessins.tcl, line 2055

RecoloreLesLinges

proc RecoloreLesLinges { TypeDeCouleur K }

Defined in:

gscope_dessins.tcl, line 2071

RecoloreUneBoite

proc RecoloreUneBoite { Nom TypeDeCouleur K {Id {}} }

Defined in:

gscope_dessins.tcl, line 2010

RecoloreUnLinge

proc RecoloreUnLinge { Nom TypeDeCouleur K {Id {}} }

Defined in:

gscope_dessins.tcl, line 2035

RectangleDegrade

proc RectangleDegrade { K X1 Y1 X2 Y2 UnPeu Passion {Orient {}} {N {}} }

Defined in:

gscope_dessins.tcl, line 623

RedefinirLaCouleur

proc RedefinirLaCouleur { K {NouveauTypeCouleur {}} {Ou {}} }

Defined in:

gscope_dessins.tcl, line 2085

RedefinirLaCouleurDuLinge

proc RedefinirLaCouleurDuLinge { K {NouveauTypeCouleur {}} }

Defined in:

gscope_dessins.tcl, line 2119

RedefinirLeFard

proc RedefinirLeFard { K {NouveauTypeCouleur {}} }

Defined in:

gscope_dessins.tcl, line 2123

ReelVersEcran

proc ReelVersEcran { z zMin zMax ZMin ZMax }

Defined in:

gscope_dessins.tcl, line 1914

ReOrdonneOoMSF

proc ReOrdonneOoMSF {  }

Defined in:

gscope_dessins.tcl, line 2535

ReParDefaut

proc ReParDefaut { {Type {}} }

Defined in:

gscope_dessins.tcl, line 70

ReTexte

proc ReTexte { Marque Texte }

Defined in:

gscope_dessins.tcl, line 1905

RetexteUneBoite

proc RetexteUneBoite { Nom Texte K {Id {}} }

Defined in:

gscope_dessins.tcl, line 1864

RscopeBoard

proc RscopeBoard { Titre {PourGif {}} }

Defined in:

gscope_dessins.tcl, line 5306

SauteSurCible

proc SauteSurCible { K x y }

Defined in:

gscope_dessins.tcl, line 3606

SB

proc SB {  }

Defined in:

gscope_dessins.tcl, line 276

Scene

proc Scene { K Action Quoi }

Defined in:

gscope_dessins.tcl, line 5602

SetListeDesPresentsAbsents

proc SetListeDesPresentsAbsents { Liste }

Defined in:

gscope_dessins.tcl, line 2197

SetSignification

proc SetSignification { K Couleur {Signe {}} }

Defined in:

gscope_dessins.tcl, line 2127

SignificationLingeFrameFard

proc SignificationLingeFrameFard { K }

Defined in:

gscope_dessins.tcl, line 1562

Sock

proc Sock {  }

Defined in:

gscope_dessins.tcl, line 3796

SortDeCoeur

proc SortDeCoeur { K X Y {Propagate {}} }

Defined in:

gscope_dessins.tcl, line 2512

Student

proc Student { L1 {L2 {}} }

Defined in:

gscope_dessins.tcl, line 246

TesteRepereBox

proc TesteRepereBox { K }

Defined in:

gscope_dessins.tcl, line 3772

TesteSavantEnBatch

proc TesteSavantEnBatch {  }

Defined in:

gscope_dessins.tcl, line 2214

TestGraphe

proc TestGraphe { {Fichier {}} }

Defined in:

gscope_dessins.tcl, line 2251

TestMDScore

proc TestMDScore {  }

Defined in:

gscope_dessins.tcl, line 258

TestStudent

proc TestStudent {  }

Defined in:

gscope_dessins.tcl, line 242

TGO

proc TGO {  }

Defined in:

gscope_dessins.tcl, line 2530

TkH

proc TkH {  }

Defined in:

gscope_dessins.tcl, line 600

ToBeOrthologue

proc ToBeOrthologue { Nom {PlusMinusOrgas {}} }

Defined in:

gscope_dessins.tcl, line 2571

TopoDuBlastN

proc TopoDuBlastN {  }

Defined in:

gscope_dessins.tcl, line 3632

TresseVRP

proc TresseVRP { {FichierMSF {}} {FichierTresse {}} {Derive 0} }

Defined in:

gscope_dessins.tcl, line 4691

TrogStatus

proc TrogStatus { Nom }

Defined in:

gscope_dessins.tcl, line 3779

VecItem

proc VecItem { Fichier }

Defined in:

gscope_dessins.tcl, line 663

VecteurVRP

proc VecteurVRP { AA }

Defined in:

gscope_dessins.tcl, line 4676

VerifieOrthoBlastP

proc VerifieOrthoBlastP {  }

Defined in:

gscope_dessins.tcl, line 493

VerticalNames

proc VerticalNames { TexteDesORGAorga }

Defined in:

gscope_dessins.tcl, line 526