gscope_pampas.tcl Annotations

Procedure Detail

BIdAccessFromEntete

proc BIdAccessFromEntete { Entete }

Defined in:

gscope_pampas.tcl, line 186

catchBlast

proc catchBlast { Protein }

Defined in:

gscope_pampas.tcl, line 401

CatchDataUniprot

proc CatchDataUniprot { texteEmbl protein }

Defined in:

gscope_pampas.tcl, line 456

checkInventory

proc checkInventory {  }

Defined in:

gscope_pampas.tcl, line 377

CheckProteinList

proc CheckProteinList { textOfWantedProteins }

Defined in:

gscope_pampas.tcl, line 490

CompletePampasProject

proc CompletePampasProject {  }

Defined in:

gscope_pampas.tcl, line 1106

CorrigeInfoPampas

proc CorrigeInfoPampas {  }

Defined in:

gscope_pampas.tcl, line 948

CorrigeMacsimsForPampas

proc CorrigeMacsimsForPampas {  }

Defined in:

gscope_pampas.tcl, line 4

CreateGscopeProjectWithPampas

proc CreateGscopeProjectWithPampas { ProjName {TexteSource {}} {Prefixe {}} {Mail {}} {Description {}} {PublicPrivate {}} args }

Defined in:

gscope_pampas.tcl, line 964

CreatePampasDb

proc CreatePampasDb {  }

Defined in:

gscope_pampas.tcl, line 566

CreatePampasDbFromGscopeProject

proc CreatePampasDbFromGscopeProject {  }

Defined in:

gscope_pampas.tcl, line 82

CreatePampasMsfFromExistingTfaOrMsf

proc CreatePampasMsfFromExistingTfaOrMsf { Dir {Prefixe {}} {FormatOrfNumbering {}} }

Defined in:

gscope_pampas.tcl, line 96

CreatePampasMsfFromExistingTfaOrMsfAVANT_20200518

proc CreatePampasMsfFromExistingTfaOrMsfAVANT_20200518 { Dir }

Defined in:

gscope_pampas.tcl, line 15

FillMutationTable

proc FillMutationTable { db }

Defined in:

gscope_pampas.tcl, line 535

FoundProteinName

proc FoundProteinName { Proteins }

Defined in:

gscope_pampas.tcl, line 346

IdDuNom

proc IdDuNom { Nom }

Defined in:

gscope_pampas.tcl, line 718

Imagette3dDuPdb

proc Imagette3dDuPdb { Access {Rep {}} {Nom {}} }

Defined in:

gscope_pampas.tcl, line 1120

Imagette3dDuPdbBlast

proc Imagette3dDuPdbBlast { Nom }

Defined in:

gscope_pampas.tcl, line 1155

Imagette3dDuPdbBlastPourTous

proc Imagette3dDuPdbBlastPourTous {  }

Defined in:

gscope_pampas.tcl, line 1143

MutationListOfPosition

proc MutationListOfPosition { Protein }

Defined in:

gscope_pampas.tcl, line 628

PampasDb

proc PampasDb {  }

Defined in:

gscope_pampas.tcl, line 612

PampasInfoForAllProteins

proc PampasInfoForAllProteins {  }

Defined in:

gscope_pampas.tcl, line 672

PampasLollipop

proc PampasLollipop { Id Pos {Sens {}} {Titre {}} {Couleur {}} {HoHeSp {}} {Compression {}} }

Defined in:

gscope_pampas.tcl, line 743

PampasProjectInfo

proc PampasProjectInfo { args }

Defined in:

gscope_pampas.tcl, line 1084

PampasServerDir

proc PampasServerDir {  }

Defined in:

gscope_pampas.tcl, line 194

PkProtein

proc PkProtein { Protein }

Defined in:

gscope_pampas.tcl, line 617

PPDB

proc PPDB { {Qui {}} {Quoi {}} {Quid {}} }

Defined in:

gscope_pampas.tcl, line 201

PPInformePourTous

proc PPInformePourTous {  }

Defined in:

gscope_pampas.tcl, line 56

PPUniprotPourTous

proc PPUniprotPourTous {  }

Defined in:

gscope_pampas.tcl, line 45

ProjetsPampas

proc ProjetsPampas {  }

Defined in:

gscope_pampas.tcl, line 439

QaG

proc QaG { Question {Format {}} }

Defined in:

gscope_pampas.tcl, line 335

RelatedPDBs

proc RelatedPDBs { Nom }

Defined in:

gscope_pampas.tcl, line 1169

RemoveBadCharacters

proc RemoveBadCharacters { Proteins }

Defined in:

gscope_pampas.tcl, line 450

selectVariants

proc selectVariants { Protein }

Defined in:

gscope_pampas.tcl, line 634

sendJsonToBrowser

proc sendJsonToBrowser { json }

#

Defined in:

gscope_pampas.tcl, line 703

SequenceDuNom

proc SequenceDuNom { Nom }

Defined in:

gscope_pampas.tcl, line 713

setVariantsAndUniprotFiche

proc setVariantsAndUniprotFiche { Protein }

Defined in:

gscope_pampas.tcl, line 649

SvgWithFeatures

proc SvgWithFeatures { Nom {aListeHoHeMut {}} {aSvg {}} {aSvgPourAli {}} }

Defined in:

gscope_pampas.tcl, line 809

SvgWithFeaturesPourTous

proc SvgWithFeaturesPourTous {  }

Defined in:

gscope_pampas.tcl, line 798

TestCreatePampasDb

proc TestCreatePampasDb {  }

Defined in:

gscope_pampas.tcl, line 604

TestJ

proc TestJ {  }

Defined in:

gscope_pampas.tcl, line 732

Zpy

proc Zpy { args }

Defined in:

gscope_pampas.tcl, line 958