The four main databases of OrthoInspector can be explored on this website and data can be exported from each protein pages. A complete dump of the SQL database can be requested by mail, but is not available for direct download as such dump represents hundreds of gigabytes.
A benchmark composed of 6 proteomes can be downloaded for test purposes.
You can download raw fasta proteomes and blast data to try the OrthoInspector installation process :
Download database schema 3+ (7 Ko)
Download RAW DATA benchmark (484 Mo) (used as example in the different tutorials).
To skip intallation process
SQLite
You can download a precomputed database based on these 6 proteomes. You can directly use the OrthoInpector package on this database.
SQLite file: Download (1 Go)
PostgreSQL and MySQL
You can download these database dumps. They contain a complete copy of an OrthoInspector database based on these 6 proteomes. You can directly use the OrthoInspector package to query this data after dumping these; a complete procedure to rapidly install and test OrthoInspector is available in the "How to rapidly test OrthoInspector" tutorial.
MySQL database dump : Download (185 Mo)
PostgresSQL database dump : Download (190 Mo)
The suite is divided into 3 executable files. All instructions, sources and javadoc are available in zip files.
Since version 1.30, the graphical interface and the 2 command-lines are merged in the same zip ; they use the same libraries.
Current version: orthoinspector_suite_3.0.zip
Download database schema 3+ (7 Kb)
If you are interested in OrthoInspector development, a git repository is accessible for remote access. You are welcome to contact odile.lecompte@unistra.fr .