My professional interests are focused on biological systems, especially the use of computational methods in human genetics and genomics:
Development of AnnotSV, a program designed for annotating and ranking Structural Variations
Expertise in variant discovery in NGS (Next Generation Sequencing) data: Whole exome/genome sequencing
Genetic analysis of rare human diseases: Variant & network analysis
Interaction with biologists and clinical geneticists
2022-PRESENT
Université de Brest, INSERM, EFS, UMR 1078, GGB (Genetics, functional Genomics and Biotechnology), Brest, France
2014-2022
Laboratory of Medical Genetics, U1112, INSERM, Strasbourg, France
2006-2014
Bioinformatics Platform of Strasbourg, BIPS, Illkirch, France
2002-2006
Integrative Bioinformatics and Genomics Laboratory, LBGI, Illkirch, France
Master EGOISt: Etude des Génomes, Outils Informatiques et Statistiques
(Study of genomes, informatics and statistic tools)
2000-2002
University of Rouen, France
BSc (Hons) in Biochemistry (4 years)
1997-2000
University of Nantes, France
Bioinformatics: BEDTools, GATK, IGV, BLAST, BWA, Samtools, SnpEff, Picard, VCFTools...
Programming languages: Python, Tcl, Perl, R, Tcsh UNIX shell script, SQL...
GitHub: "AnnotSV" popular repository under active development
Platforms: Linux, Windows
English: intermediate level B2
Proven effective and efficient organizational skills
Appointed person first aid certificate
Fire safety assistant
Horse riding
Table tennis
Hiking